RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 TMEM272A0A1B0GTI8 110 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 TMEM14DPA8MWL7 114 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 E7EQL1 145 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 LDLRAD4O15165 306 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 TPD52L2O43399 206 aaKnown RBP11.88□□□□□ -0.51
SMAD9-204ENST00000483941 LILRA1O75019 489 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 CRTAPO75718 401 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-204ENST00000483941 ADH4P08319 380 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 VSIG8P0DPA2 414 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 TNFRSF1AP19438 455 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 CPT2P23786 658 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 MPZP25189 248 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 PITPNBP48739 271 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 PPP5CP53041 499 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 SNRPD2P62316 118 aaKnown RBP11.88□□□□□ -0.51
SMAD9-204ENST00000483941 SNTB1Q13884 538 aaKnown RBP11.88□□□□□ -0.51
SMAD9-204ENST00000483941 ALKBH6Q3KRA9 238 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 SLC22A6Q4U2R8 563 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 TMEM69Q5SWH9 247 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 PYHIN1Q6K0P9 492 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 HAGHLQ6PII5 290 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-204ENST00000483941 FIP1L1Q6UN15 594 aaKnown RBP11.88□□□□□ -0.51
SMAD9-204ENST00000483941 SLC25A26Q70HW3 274 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 GDPD1Q8N9F7 314 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 OR5D18Q8NGL1 313 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 OR5H6Q8NGV6 325 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 NINJ1Q92982 152 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 BORCS5Q969J3 196 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 RFT1Q96AA3 541 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 ELMOD3Q96FG2 381 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 ATG5Q9H1Y0 275 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 MIXL1Q9H2W2 232 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 GSX1Q9H4S2 264 aaPredicted RBP11.88□□□□□ -0.51
SMAD9-204ENST00000483941 MSL2Q9HCI7 577 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 IL19Q9UHD0 177 aa11.88□□□□□ -0.51
SMAD9-204ENST00000483941 IGKV1-27A0A075B6S5 117 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 A0A0B4J203 849 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 AKR7A2O43488 359 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 XRCC3O43542 346 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 CDC14BO60729 498 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 HTR3BO95264 441 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 MNDAP41218 407 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 MRPS10P82664 201 aaKnown RBP11.87□□□□□ -0.51
SMAD9-204ENST00000483941 QRFPP83859 136 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 IL18Q14116 193 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 AGAP6Q5VW22 663 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 ELP2Q6IA86 826 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 LINC00596Q86U02 117 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 CMTM4Q8IZR5 234 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 MUC15Q8N387 334 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 OR56B1Q8NGI3 324 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 FBXW5Q969U6 566 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 CCDC32Q9BV29 185 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 FN3KRPQ9HA64 309 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 PALMDQ9NP74 551 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 DYNLRB1Q9NP97 96 aa11.87□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A10PA6NDY2 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A18PA6NE21 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A16PA6NEW6 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A20PA6NIJ5 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A8PA6NJQ4 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A7PA6NKC0 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 C17orf100A8MU93 164 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A22PA8MWA6 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A12PA8MX19 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A5PA8MXJ8 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A23PA8MXZ1 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 IFNL4K9M1U5 179 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 MLNRO43193 412 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 SPRY3O43610 288 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 CTAG2O75638 210 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 PTBP3O95758 552 aaKnown RBP11.86□□□□□ -0.51
SMAD9-204ENST00000483941 MPIG6BO95866 241 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 EIF4EP06730 217 aaKnown RBP11.86□□□□□ -0.51
SMAD9-204ENST00000483941 GRPP07492 148 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 CD55P08174 381 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 INHBBP09529 407 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A15PP0C7V4 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A13PP0C7W8 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A14PP0C7W9 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 FAM90A24PP0C7X0 464 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 MGMTP16455 207 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 SERPINA2P20848 420 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 GATA4P43694 442 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 TNFAIP6P98066 277 aaPredicted RBP11.86□□□□□ -0.51
SMAD9-204ENST00000483941 Q6ZR03 302 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 OSR2Q8N2R0 312 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 SCCPDHQ8NBX0 429 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 Q8NFD4 153 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 OR10AD1Q8NGE0 317 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 OR51T1Q8NGJ9 327 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 OR10Z1Q8NGY1 313 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 AQP3Q92482 292 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 DLL4Q9NR61 685 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 DECR2Q9NUI1 292 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 RASL12Q9NYN1 266 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 GLS2Q9UI32 602 aa11.86□□□□□ -0.51
SMAD9-204ENST00000483941 PRR14LQ5THK1 2151 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms