RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 SPHARQ15513 63 aa13.53□□□□□ -0.24
COL2A1-206ENST00000483376 ACP7Q6ZNF0 438 aa13.53□□□□□ -0.24
COL2A1-206ENST00000483376 TRMT10AQ8TBZ6 339 aaKnown RBP13.53□□□□□ -0.24
COL2A1-206ENST00000483376 RAB40AQ8WXH6 277 aa13.53□□□□□ -0.24
COL2A1-206ENST00000483376 TMEM106AQ96A25 262 aa13.53□□□□□ -0.24
COL2A1-206ENST00000483376 CPNE2Q96FN4 548 aaPredicted RBP13.53□□□□□ -0.24
COL2A1-206ENST00000483376 BEX2Q9BXY8 128 aa13.53□□□□□ -0.24
COL2A1-206ENST00000483376 YTHDF1Q9BYJ9 559 aaKnown RBP13.53□□□□□ -0.24
COL2A1-206ENST00000483376 ISYNA1Q9NPH2 558 aa13.53□□□□□ -0.24
COL2A1-206ENST00000483376 JMJD1CQ15652 2540 aa13.53□□□□□ -0.24
COL2A1-206ENST00000483376 WNK2Q9Y3S1 2297 aa13.52□□□□□ -0.24
COL2A1-206ENST00000483376 IGHV3OR15-7A0A075B7D8 119 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 IGHV2-70DA0A0C4DH43 119 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 KIR2DS1A0A191URI9 304 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 NKX6-3A6NJ46 265 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 SIGLEC5O15389 551 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 PHF1O43189 567 aaPredicted RBP13.52□□□□□ -0.25
COL2A1-206ENST00000483376 ALDOBP05062 364 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 LIPFP07098 398 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 OCM2P0CE71 109 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 PSG2P11465 335 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 FSTP19883 344 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 MTCP1P56278 107 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 GABARAPL2P60520 117 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 PAX8Q06710 450 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 DOC2BQ14184 412 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 KRTAP21-3Q3LHN1 58 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 Q499Y3 187 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 ASPHD2Q6ICH7 369 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 ANGPTL5Q86XS5 388 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 MKXQ8IYA7 352 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 SAXO1Q8IYX7 474 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 OR13C9Q8NGT0 318 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 NPRL2Q8WTW4 380 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 SGCDQ92629 289 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 SEH1LQ96EE3 360 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 SDSLQ96GA7 329 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 MED30Q96HR3 178 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 MMP26Q9NRE1 261 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 MXRA5Q9NR99 2828 aa13.52□□□□□ -0.25
COL2A1-206ENST00000483376 DOCK11Q5JSL3 2073 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 IGKV1D-17A0A075B6S4 117 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 FCN3O75636 299 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 KNG1P01042 644 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 CELP19835 753 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 RAB3AP20336 220 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 CAV3P56539 151 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 IL13RA1P78552 427 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 PDZK1IP1Q13113 114 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 TBCEQ15813 527 aaPredicted RBP13.51□□□□□ -0.25
COL2A1-206ENST00000483376 FAHD2BQ6P2I3 314 aaPredicted RBP13.51□□□□□ -0.25
COL2A1-206ENST00000483376 CRIP3Q6Q6R5 217 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 BTNL3Q6UXE8 466 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 MS4A15Q8N5U1 240 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 ZSCAN4Q8NAM6 433 aaPredicted RBP13.51□□□□□ -0.25
COL2A1-206ENST00000483376 FAHD2AQ96GK7 314 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 CEP19Q96LK0 163 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 GAFA1Q96PS6 74 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 SMURF1Q9HCE7 757 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 MTCH1Q9NZJ7 389 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 OPN4Q9UHM6 478 aa13.51□□□□□ -0.25
COL2A1-206ENST00000483376 LOC105371242A0A075B767 164 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 TRBV5-7A0A0A0MS05 114 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 DVL1O14640 695 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 ENSAO43768 121 aaKnown RBP13.5□□□□□ -0.25
COL2A1-206ENST00000483376 NXPH2O95156 264 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 CYB5AP00167 134 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 FSHBP01225 129 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 OCMP0CE72 109 aaPredicted RBP13.5□□□□□ -0.25
COL2A1-206ENST00000483376 IGFBP3P17936 291 aaPredicted RBP13.5□□□□□ -0.25
COL2A1-206ENST00000483376 SRD5A1P18405 259 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 KISS1Q15726 138 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 LRRC10Q5BKY1 277 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 C1orf229Q6ZS94 237 aaPredicted RBP13.5□□□□□ -0.25
COL2A1-206ENST00000483376 SLC25A26Q70HW3 274 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 C1QL2Q7Z5L3 287 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 C8orf46Q8TAG6 207 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 OR5M11Q96RB7 305 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 CCL13Q99616 98 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 C7orf69Q9H7B7 122 aa13.5□□□□□ -0.25
COL2A1-206ENST00000483376 C22orf46C9J442 243 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 NDUFB3O43676 98 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 AVPP01185 164 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 MAPK3P27361 379 aaPredicted RBP13.49□□□□□ -0.25
COL2A1-206ENST00000483376 SOX2P48431 317 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 ZP1P60852 638 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 TPBGQ13641 420 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 ZNF561Q8N587 486 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 FAM216BQ8N7L0 139 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 ZFP41Q8N8Y5 198 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 LY6G5BQ8NDX9 201 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 ZNF488Q96MN9 340 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 NUDT16L1Q9BRJ7 211 aaKnown RBP13.49□□□□□ -0.25
COL2A1-206ENST00000483376 MRI1Q9BV20 369 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 TMEM138Q9NPI0 162 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 SNTG1Q9NSN8 517 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 TAS2R4Q9NYW5 299 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 FOXJ3Q9UPW0 622 aa13.49□□□□□ -0.25
COL2A1-206ENST00000483376 ARHGAP32A7KAX9 2087 aa13.48□□□□□ -0.25
COL2A1-206ENST00000483376 RFPL4AA6NLU0 287 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms