RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 TMEM165Q9HC07 324 aa14.94□□□□□ -0.02
CPNE1-224ENST00000483359 RBFOX1Q9NWB1 397 aaKnown RBP14.94□□□□□ -0.02
CPNE1-224ENST00000483359 SSR3Q9UNL2 185 aa14.94□□□□□ -0.02
CPNE1-224ENST00000483359 SHISA3A0PJX4 238 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 LGALS8O00214 317 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 NXPH2O95156 264 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 GYPAP02724 150 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 ALDOBP05062 364 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 BCL3P20749 454 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 CFHR2P36980 270 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 MICBQ29980 383 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 ZNF404Q494X3 552 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 SPNS3Q6ZMD2 512 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 C1QL2Q7Z5L3 287 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 NKAIN3Q8N8D7 197 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 PNLDC1Q8NA58 520 aaKnown RBP14.93□□□□□ -0.02
CPNE1-224ENST00000483359 PHYHIPQ92561 330 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 YIPF6Q96EC8 236 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 NRIP2Q9BQI9 281 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 AK6Q9Y3D8 172 aaKnown RBP14.93□□□□□ -0.02
CPNE1-224ENST00000483359 SMIM30A4D0T7 59 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 CDRT1O95170 752 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 TFAP2AP05549 437 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 CR1P17927 2039 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 SNU13P55769 128 aaKnown RBP14.93□□□□□ -0.02
CPNE1-224ENST00000483359 LRRC28Q86X40 367 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-224ENST00000483359 MKXQ8IYA7 352 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 MUC20Q8N307 709 aaPredicted RBP14.93□□□□□ -0.02
CPNE1-224ENST00000483359 OR13F1Q8NGS4 319 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 CENPOQ9BU64 300 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 PCDHB10Q9UN67 800 aa14.93□□□□□ -0.02
CPNE1-224ENST00000483359 TRAV38-1A0A0B4J264 116 aa14.92□□□□□ -0.02
CPNE1-224ENST00000483359 CEACAM18A8MTB9 384 aa14.92□□□□□ -0.02
CPNE1-224ENST00000483359 TRAPPC2LH3BP13 241 aa14.92□□□□□ -0.02
CPNE1-224ENST00000483359 MYL9P24844 172 aa14.92□□□□□ -0.02
CPNE1-224ENST00000483359 LSM3P62310 102 aaKnown RBP14.92□□□□□ -0.02
CPNE1-224ENST00000483359 SPICQ8N5J4 248 aa14.92□□□□□ -0.02
CPNE1-224ENST00000483359 OR10K1Q8NGX5 313 aa14.92□□□□□ -0.02
CPNE1-224ENST00000483359 EMG1Q92979 244 aaKnown RBP14.92□□□□□ -0.02
CPNE1-224ENST00000483359 CNTD2Q9H8S5 307 aa14.92□□□□□ -0.02
CPNE1-224ENST00000483359 NLKQ9UBE8 527 aa14.92□□□□□ -0.02
CPNE1-224ENST00000483359 IL36RNQ9UBH0 155 aa14.92□□□□□ -0.02
CPNE1-224ENST00000483359 SFTPBP07988 381 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 GALP22466 123 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 TGFBR1P36897 503 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 TEX36Q5VZQ5 186 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 LYPD2Q6UXB3 125 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 ACP7Q6ZNF0 438 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 FUNDC2Q9BWH2 189 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 OR14J1Q9UGF5 321 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 AIREO43918 545 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 RPS2P15880 293 aaKnown RBP14.91□□□□□ -0.02
CPNE1-224ENST00000483359 FGF9P31371 208 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-224ENST00000483359 PTGFRP43088 359 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 CEBPDP49716 269 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-224ENST00000483359 ERVK11-1P61568 191 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 LOXL1Q08397 574 aaPredicted RBP14.91□□□□□ -0.02
CPNE1-224ENST00000483359 SMIM21Q3B7S5 101 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 TMEM155Q4W5P6 130 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 AWAT2Q6E213 333 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 OR4D6Q8NGJ1 314 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 S100A13Q99584 98 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 GFI1Q99684 422 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 ZNF665Q9H7R5 613 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 SCOCQ9UIL1 159 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 ING4Q9UNL4 249 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 GSTK1Q9Y2Q3 226 aa14.91□□□□□ -0.02
CPNE1-224ENST00000483359 A0A1B0GW55 424 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 MEGF11A6BM72 1044 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 OR2AT4A6NND4 320 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 NOS1APO75052 506 aaPredicted RBP14.9□□□□□ -0.02
CPNE1-224ENST00000483359 DUX4L2P0CJ85 424 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 DUX4L3P0CJ86 424 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 DUX4L4P0CJ87 422 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 DUX4L5P0CJ88 424 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 DUX4L6P0CJ89 424 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 DUX4L7P0CJ90 424 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 MUC1P15941 1255 aaPredicted RBP14.9□□□□□ -0.02
CPNE1-224ENST00000483359 PRKACAP17612 351 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 OR10A3P58181 314 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 SEC61A1P61619 476 aaKnown RBP14.9□□□□□ -0.02
CPNE1-224ENST00000483359 TIMM50Q3ZCQ8 353 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 GLT8D1Q68CQ7 371 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 DUX4L9Q6RFH8 374 aaPredicted RBP14.9□□□□□ -0.02
CPNE1-224ENST00000483359 CCL13Q99616 98 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 LPAR2Q9HBW0 351 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 HES4Q9HCC6 221 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 DUX4Q9UBX2 424 aa14.9□□□□□ -0.02
CPNE1-224ENST00000483359 MRPS28Q9Y2Q9 187 aaKnown RBP14.9□□□□□ -0.02
CPNE1-224ENST00000483359 TMPRSS2O15393 492 aa14.89□□□□□ -0.03
CPNE1-224ENST00000483359 ADAM20O43506 726 aa14.89□□□□□ -0.03
CPNE1-224ENST00000483359 KDM4BO94953 1096 aa14.89□□□□□ -0.03
CPNE1-224ENST00000483359 IGHV2-5P01817 119 aa14.89□□□□□ -0.03
CPNE1-224ENST00000483359 GABRA2P47869 451 aa14.89□□□□□ -0.03
CPNE1-224ENST00000483359 ALDH3B2P48448 385 aa14.89□□□□□ -0.03
CPNE1-224ENST00000483359 RSU1Q15404 277 aa14.89□□□□□ -0.03
CPNE1-224ENST00000483359 STUMQ69YW2 141 aa14.89□□□□□ -0.03
CPNE1-224ENST00000483359 DCDC5Q6ZRR9 648 aa14.89□□□□□ -0.03
CPNE1-224ENST00000483359 GPR141Q7Z602 305 aa14.89□□□□□ -0.03
CPNE1-224ENST00000483359 FAM216BQ8N7L0 139 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms