RNA–Protein interactions for RNA: ENST00000479080.1

CHD3-210, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-210ENST00000479080 ING4Q9UNL4 249 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 CELSR2Q9HCU4 2923 aa11.03□□□□□ -0.64
CHD3-210ENST00000479080 A6NLC8 198 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 SRRM5B3KS81 715 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 BPNT1O95861 308 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 CYB5R3P00387 301 aaPredicted RBP11.02□□□□□ -0.65
CHD3-210ENST00000479080 LHBP01229 141 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 IGHV4-39P01824 125 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 EIF4EP06730 217 aaKnown RBP11.02□□□□□ -0.65
CHD3-210ENST00000479080 ACAA1P09110 424 aaPredicted RBP11.02□□□□□ -0.65
CHD3-210ENST00000479080 BMP4P12644 408 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 CD80P33681 288 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 CFHR2P36980 270 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 ZNF404Q494X3 552 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 LAX1Q8IWV1 398 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 C19orf18Q8NEA5 215 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 OR10Z1Q8NGY1 313 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 LRRC29Q8WV35 223 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 KCTD12Q96CX2 325 aaKnown RBP11.02□□□□□ -0.65
CHD3-210ENST00000479080 LPAR5Q9H1C0 372 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 BANF2Q9H503 90 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 NEK6Q9HC98 313 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 ABRACLQ9P1F3 81 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 SPATA2Q9UM82 520 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 TANC2Q9HCD6 1990 aa11.02□□□□□ -0.65
CHD3-210ENST00000479080 CHD3Q12873 2000 aaKnown RBP11.01□□□□□ -0.65
CHD3-210ENST00000479080 CSMD2Q7Z408 3487 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 FOXI3A8MTJ6 420 aaPredicted RBP11.01□□□□□ -0.65
CHD3-210ENST00000479080 CDC14BO60729 498 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 HPGDSO60760 199 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 ARSBP15848 533 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 AMY2BP19961 511 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 SERPINA2P20848 420 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 TNFSF4P23510 183 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 DYNC1I2Q13409 638 aaKnown RBP11.01□□□□□ -0.65
CHD3-210ENST00000479080 ZNF181Q2M3W8 571 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 PIGYQ3MUY2 71 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 MOGAT2Q3SYC2 334 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 SLC22A6Q4U2R8 563 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 ELP2Q6IA86 826 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 CROCCP3Q8IVE0 287 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 PNLDC1Q8NA58 520 aaKnown RBP11.01□□□□□ -0.65
CHD3-210ENST00000479080 MCFD2Q8NI22 146 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 FAM46BQ96A09 425 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 CEP19Q96LK0 163 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 CCL19Q99731 98 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 NICN1Q9BSH3 213 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 METTL9Q9H1A3 318 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 FN3KRPQ9HA64 309 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 ZNF701Q9NV72 531 aaPredicted RBP11.01□□□□□ -0.65
CHD3-210ENST00000479080 COMMD3Q9UBI1 195 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 A3GALT2U3KPV4 340 aa11.01□□□□□ -0.65
CHD3-210ENST00000479080 IGHV1-69-2A0A0G2JMI3 117 aa11□□□□□ -0.65
CHD3-210ENST00000479080 TMEM178BH3BS89 294 aa11□□□□□ -0.65
CHD3-210ENST00000479080 HTR3BO95264 441 aa11□□□□□ -0.65
CHD3-210ENST00000479080 MPIG6BO95866 241 aa11□□□□□ -0.65
CHD3-210ENST00000479080 UBBP0CG47 229 aa11□□□□□ -0.65
CHD3-210ENST00000479080 SOX6P35712 828 aa11□□□□□ -0.65
CHD3-210ENST00000479080 BMXP51813 675 aa11□□□□□ -0.65
CHD3-210ENST00000479080 GMFBP60983 142 aa11□□□□□ -0.65
CHD3-210ENST00000479080 FGF12P61328 243 aa11□□□□□ -0.65
CHD3-210ENST00000479080 RPS27AP62979 156 aaKnown RBP11□□□□□ -0.65
CHD3-210ENST00000479080 MZT1Q08AG7 82 aa11□□□□□ -0.65
CHD3-210ENST00000479080 PDCD1Q15116 288 aa11□□□□□ -0.65
CHD3-210ENST00000479080 SIGIRRQ6IA17 410 aa11□□□□□ -0.65
CHD3-210ENST00000479080 OR2W3Q7Z3T1 314 aa11□□□□□ -0.65
CHD3-210ENST00000479080 MKXQ8IYA7 352 aa11□□□□□ -0.65
CHD3-210ENST00000479080 CMTM4Q8IZR5 234 aa11□□□□□ -0.65
CHD3-210ENST00000479080 OR6Q1Q8NGQ2 317 aa11□□□□□ -0.65
CHD3-210ENST00000479080 ZNF671Q8TAW3 534 aa11□□□□□ -0.65
CHD3-210ENST00000479080 ERGIC1Q969X5 290 aa11□□□□□ -0.65
CHD3-210ENST00000479080 CPNE2Q96FN4 548 aaPredicted RBP11□□□□□ -0.65
CHD3-210ENST00000479080 Q96M66 194 aa11□□□□□ -0.65
CHD3-210ENST00000479080 HMG20AQ9NP66 347 aa11□□□□□ -0.65
CHD3-210ENST00000479080 DECR2Q9NUI1 292 aa11□□□□□ -0.65
CHD3-210ENST00000479080 TMEM106BQ9NUM4 274 aa11□□□□□ -0.65
CHD3-210ENST00000479080 RNF7Q9UBF6 113 aa11□□□□□ -0.65
CHD3-210ENST00000479080 GHRLQ9UBU3 117 aa11□□□□□ -0.65
CHD3-210ENST00000479080 PPP1R3CQ9UQK1 317 aa11□□□□□ -0.65
CHD3-210ENST00000479080 PLEKHA6Q9Y2H5 1048 aa11□□□□□ -0.65
CHD3-210ENST00000479080 POLDIP2Q9Y2S7 368 aa11□□□□□ -0.65
CHD3-210ENST00000479080 IGHV3OR15-7A0A075B7D8 119 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 A0A1B0GW55 424 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 hCG_1807616A0A1W2PRN6 198 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 TRAPPC2LH3BP13 241 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 TPD52L2O43399 206 aaKnown RBP10.99□□□□□ -0.65
CHD3-210ENST00000479080 TMEM127O75204 238 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 FCN3O75636 299 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 CLPXO76031 633 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 ZNF205O95201 554 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 DUX4L2P0CJ85 424 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 DUX4L3P0CJ86 424 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 DUX4L4P0CJ87 422 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 DUX4L5P0CJ88 424 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 DUX4L6P0CJ89 424 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 DUX4L7P0CJ90 424 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 PAX1P15863 534 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 MGMTP16455 207 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 ELK1P19419 428 aa10.99□□□□□ -0.65
CHD3-210ENST00000479080 TNFRSF1AP19438 455 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms