RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 PCK2Q16822 640 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 TBC1D28Q2M2D7 210 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 ZNF674Q2M3X9 581 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 CCNJQ5T5M9 372 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 LINC00242Q5T6M2 205 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 ZNF730Q6ZMV8 503 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 GOLGA7Q7Z5G4 137 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 CCDC91Q7Z6B0 441 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 NAT8LQ8N9F0 302 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 OR51D1Q8NGF3 324 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 SLC7A13Q8TCU3 470 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 RNASE8Q8TDE3 154 aaKnown RBP3.34□□□□□ -1.87
VPS50-214ENST00000477935 GEMIN6Q8WXD5 167 aaKnown RBP3.34□□□□□ -1.87
VPS50-214ENST00000477935 TUBGCP3Q96CW5 907 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 CCDC126Q96EE4 140 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 ARHGDIGQ99819 225 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 TAPBPLQ9BX59 468 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 ERVK-18Q9QC07 812 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 EIF3KQ9UBQ5 218 aaKnown RBP3.34□□□□□ -1.87
VPS50-214ENST00000477935 SLC35A3Q9Y2D2 325 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 POFUT2Q9Y2G5 429 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 KPTNQ9Y664 436 aa3.34□□□□□ -1.87
VPS50-214ENST00000477935 TMED7-TICAM2A0A0A6YYA0 188 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 LOC102725191A0A1B0GVB3 256 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 A0A1B0GW55 424 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 TCRBV4S1A1TA0A5B7 111 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 C5orf51A6NDU8 294 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 ZSCAN5BA6NJL1 495 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 OR7A17O14581 309 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 CCSO14618 274 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 NDUFA2O43678 99 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 LY6G6CO95867 125 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 PDYNP01213 254 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 KRT14P02533 472 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 KRT6AP02538 564 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 KRT6BP04259 564 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 ANXA4P09525 319 aaPredicted RBP3.33□□□□□ -1.88
VPS50-214ENST00000477935 UBTFL6P0CB48 400 aaPredicted RBP3.33□□□□□ -1.88
VPS50-214ENST00000477935 DUX4L2P0CJ85 424 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 DUX4L3P0CJ86 424 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 DUX4L5P0CJ88 424 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 DUX4L6P0CJ89 424 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 DUX4L7P0CJ90 424 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 UQCRBP14927 111 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 TUBG1P23258 451 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 AHCYP23526 432 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 KRT6CP48668 564 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 POLR2HP52434 150 aaKnown RBP3.33□□□□□ -1.88
VPS50-214ENST00000477935 OR7A5Q15622 319 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 ZKSCAN8Q15776 578 aaPredicted RBP3.33□□□□□ -1.88
VPS50-214ENST00000477935 ZNF141Q15928 474 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 ZNF181Q2M3W8 571 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 NDUFAF6Q330K2 333 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 ZNF404Q494X3 552 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 ATP6AP1LQ52LC2 224 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 DCST2Q5T1A1 773 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 DUX4L9Q6RFH8 374 aaPredicted RBP3.33□□□□□ -1.88
VPS50-214ENST00000477935 LRRC8AQ8IWT6 810 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 OR5AU1Q8NGC0 362 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 OR6T1Q8NGN1 323 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 CHMP6Q96FZ7 201 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 SSX3Q99909 188 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 TMEM246Q9BRR3 403 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 SIRPDQ9H106 197 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 EXOSC3Q9NQT5 275 aaKnown RBP3.33□□□□□ -1.88
VPS50-214ENST00000477935 NANSQ9NR45 359 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 TUBG2Q9NRH3 451 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 DCAF16Q9NXF7 216 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 ABCD2Q9UBJ2 740 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 DUX4Q9UBX2 424 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 TMCO1Q9UM00 188 aa3.33□□□□□ -1.88
VPS50-214ENST00000477935 A0A096LPI6 279 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 H3BUX3 64 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 M0R3G1 203 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 NPFFO15130 113 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 SYT7O43581 403 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 SCN2BO60939 215 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 ZNF253O75346 499 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 KBTBD11O94819 623 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 FARS2O95363 451 aaKnown RBP3.32□□□□□ -1.88
VPS50-214ENST00000477935 AK1P00568 194 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 IGF2P01344 180 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 IFNA6P05013 189 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 HMGN2P05204 90 aaKnown RBP3.32□□□□□ -1.88
VPS50-214ENST00000477935 GUSBP08236 651 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 TFPTP0C1Z6 253 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 OR9G9P0C7N8 305 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 CCNA2P20248 432 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 CXCR1P25024 350 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 CRABP2P29373 138 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 APLNRP35414 380 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 ID1P41134 155 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 IDH2P48735 452 aaKnown RBP3.32□□□□□ -1.88
VPS50-214ENST00000477935 CCT3P49368 545 aaKnown RBP3.32□□□□□ -1.88
VPS50-214ENST00000477935 RGS6P49758 472 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 P2RY4P51582 365 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 UBE2E1P51965 193 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 FOXA1P55317 472 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 ARF6P62330 175 aa3.32□□□□□ -1.88
VPS50-214ENST00000477935 GLO1Q04760 184 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms