RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 JUNBP17275 347 aaPredicted RBP13.26□□□□□ -0.29
COPS3-207ENST00000477299 FSTP19883 344 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 BCL3P20749 454 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 GLRA1P23415 457 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 GADD45AP24522 165 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 MDH2P40926 338 aaKnown RBP13.26□□□□□ -0.29
COPS3-207ENST00000477299 OR3A4PP47883 348 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 ERVK11-1P61568 191 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 IL24Q13007 206 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 DDI2Q5TDH0 399 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 TEX36Q5VZQ5 186 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 LYPD6Q86Y78 171 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 C1orf87Q8N0U7 546 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 POC1AQ8NBT0 407 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 OR51F2Q8NH61 342 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 ZNF671Q8TAW3 534 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 CCL13Q99616 98 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 GAL3ST1Q99999 423 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 NRIP2Q9BQI9 281 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 TMEM138Q9NPI0 162 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 RBFOX1Q9NWB1 397 aaKnown RBP13.26□□□□□ -0.29
COPS3-207ENST00000477299 CTSZQ9UBR2 303 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 FOXJ3Q9UPW0 622 aa13.26□□□□□ -0.29
COPS3-207ENST00000477299 TRDV1A0A1B0GX56 115 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 CDRT1O95170 752 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 IGHV2-5P01817 119 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 ALDOBP05062 364 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 INHBBP09529 407 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 IGHV4-31P0DP07 118 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 SRMP19623 302 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 PPP3R1P63098 170 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 TMEM249Q2WGJ8 235 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 HSD17B12Q53GQ0 312 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 C22orf42Q6IC83 251 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 CD200R1LQ6Q8B3 271 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 METAP1DQ6UB28 335 aaPredicted RBP13.25□□□□□ -0.29
COPS3-207ENST00000477299 ACP7Q6ZNF0 438 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 OR10K1Q8NGX5 313 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 C18orf12Q96KH6 178 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 GPER1Q99527 375 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 ZNF665Q9H7R5 613 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 PATZ1Q9HBE1 687 aaKnown RBP13.25□□□□□ -0.29
COPS3-207ENST00000477299 LPAR2Q9HBW0 351 aa13.25□□□□□ -0.29
COPS3-207ENST00000477299 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.25□□□□□ -0.293e-6■■■■■ 46.6
COPS3-207ENST00000477299 IGKV1D-17A0A075B6S4 117 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 NOS1APO75052 506 aaPredicted RBP13.24□□□□□ -0.29
COPS3-207ENST00000477299 SFTPBP07988 381 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 WNT2P09544 360 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 TMEM225BP0DP42 221 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 PSG2P11465 335 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 CD36P16671 472 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 ZFP36P26651 326 aaKnown RBP13.24□□□□□ -0.29
COPS3-207ENST00000477299 CALRP27797 417 aaKnown RBP13.24□□□□□ -0.29
COPS3-207ENST00000477299 DUSP1P28562 367 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 ZNF93P35789 620 aaPredicted RBP13.24□□□□□ -0.29
COPS3-207ENST00000477299 TGFBR1P36897 503 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 SNU13P55769 128 aaKnown RBP13.24□□□□□ -0.29
COPS3-207ENST00000477299 TRAM1Q15629 374 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 TMEM155Q4W5P6 130 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 Q71RC1 249 aaPredicted RBP13.24□□□□□ -0.29
COPS3-207ENST00000477299 CD177Q8N6Q3 437 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 TNFAIP8L1Q8WVP5 186 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 YIPF6Q96EC8 236 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 CEP19Q96LK0 163 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 NEK6Q9HC98 313 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 HES4Q9HCC6 221 aa13.24□□□□□ -0.29
COPS3-207ENST00000477299 EXOSC4Q9NPD3 245 aaKnown RBP13.24□□□□□ -0.29
COPS3-207ENST00000477299 TXNL4BQ9NX01 149 aaKnown RBP13.24□□□□□ -0.29
COPS3-207ENST00000477299 AK6Q9Y3D8 172 aaKnown RBP13.24□□□□□ -0.29
COPS3-207ENST00000477299 A0A1W2PP11 408 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 SMIM30A4D0T7 59 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 OR2AT4A6NND4 320 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 F5H0A9 414 aaPredicted RBP13.23□□□□□ -0.29
COPS3-207ENST00000477299 PHF1O43189 567 aaPredicted RBP13.23□□□□□ -0.29
COPS3-207ENST00000477299 NXPH2O95156 264 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 LY6G6DO95868 133 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 TFAP2AP05549 437 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 ACAA1P09110 424 aaPredicted RBP13.23□□□□□ -0.29
COPS3-207ENST00000477299 MAPK3P27361 379 aaPredicted RBP13.23□□□□□ -0.29
COPS3-207ENST00000477299 PDCD1Q15116 288 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 STUMQ69YW2 141 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 ZNF841Q6ZN19 808 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 JAGN1Q8N5M9 183 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 FAM216BQ8N7L0 139 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 OR4D6Q8NGJ1 314 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 ANGPTL6Q8NI99 470 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 MSI2Q96DH6 328 aaKnown RBP13.23□□□□□ -0.29
COPS3-207ENST00000477299 CHCHD6Q9BRQ6 235 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 KCNK15Q9H427 330 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 CNTD2Q9H8S5 307 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 SMURF1Q9HCE7 757 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 TCF7L1Q9HCS4 588 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 NLKQ9UBE8 527 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 CKLFQ9UBR5 152 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 DNAJB11Q9UBS4 358 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 PCDHB10Q9UN67 800 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 ING4Q9UNL4 249 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 POLDIP2Q9Y2S7 368 aa13.23□□□□□ -0.29
COPS3-207ENST00000477299 TLN2Q9Y4G6 2542 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms