RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 SOX8P57073 446 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 ACTBP60709 375 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 GMFBP60983 142 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 ACTG1P63261 375 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 ZNF260Q3ZCT1 412 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 HIKESHIQ53FT3 197 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 RNASE10Q5GAN6 216 aaKnown RBP11.65□□□□□ -0.54
HDAC7-221ENST00000477203 LYPD6Q86Y78 171 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 OR10R2Q8NGX6 335 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 FOXRED1Q96CU9 486 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-221ENST00000477203 ZNF251Q9BRH9 671 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 OR2H1Q9GZK4 316 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 ZNF701Q9NV72 531 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-221ENST00000477203 NAP1L6A6NFF2 107 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 ST8SIA5O15466 376 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 ERCC1P07992 297 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-221ENST00000477203 VAMP1P23763 118 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 NFYBP25208 207 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 TAS2R19P59542 299 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 SEC61A1P61619 476 aaKnown RBP11.65□□□□□ -0.54
HDAC7-221ENST00000477203 SMCO1Q147U7 214 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 TAF9Q16594 264 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 SPATA46Q5T0L3 261 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 METTL11BQ5VVY1 283 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 DCAF12L2Q5VW00 463 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 ABLIM2Q6H8Q1 611 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 GLDNQ6ZMI3 551 aaPredicted RBP11.65□□□□□ -0.54
HDAC7-221ENST00000477203 C6orf201Q7Z4U5 140 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 PNLDC1Q8NA58 520 aaKnown RBP11.65□□□□□ -0.54
HDAC7-221ENST00000477203 SEMA6DQ8NFY4 1073 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 ARHGAP21Q5T5U3 1957 aa11.65□□□□□ -0.54
HDAC7-221ENST00000477203 LOC390937A0A1W2PQ73 354 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 KLRC4-KLRK1H3BQV0 150 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 FARS2O95363 451 aaKnown RBP11.64□□□□□ -0.55
HDAC7-221ENST00000477203 MGMTP16455 207 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 TMEM50BP56557 158 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 SNTB1Q13884 538 aaKnown RBP11.64□□□□□ -0.55
HDAC7-221ENST00000477203 RHOUQ7L0Q8 258 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 RXFP4Q8TDU9 374 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 SEC22AQ96IW7 307 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 CHD8Q9HCK8 2581 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 PQLC2LA1A4F0 135 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 TUBAL3A6NHL2 446 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 BPNT1O95861 308 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 ZNF35P13682 527 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 QRFPP83859 136 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 ATXN7L3Q14CW9 347 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-221ENST00000477203 RAB35Q15286 201 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 ZNF660Q6AZW8 331 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-221ENST00000477203 JMJD6Q6NYC1 403 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-221ENST00000477203 PGAP1Q75T13 922 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 CPT1CQ8TCG5 803 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 GLYATL2Q8WU03 294 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 C15orf40Q8WUR7 153 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 NTNG2Q96CW9 530 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 ZNF552Q9H707 407 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-221ENST00000477203 SLC17A5Q9NRA2 495 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 PCDHGA1Q9Y5H4 931 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 TIMM10BQ9Y5J6 103 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 ATRXP46100 2492 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 TMEM82A0PJX8 343 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 NGFP01138 241 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 IFNA6P05013 189 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 RBMXP38159 391 aaKnown RBP11.64□□□□□ -0.55
HDAC7-221ENST00000477203 AKR1C3P42330 323 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 NOVA1P51513 510 aaKnown RBP11.64□□□□□ -0.55
HDAC7-221ENST00000477203 PDZK1IP1Q13113 114 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 MOB3CQ70IA8 216 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 RHOVQ96L33 236 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 C1orf147Q96MC9 270 aaPredicted RBP11.64□□□□□ -0.55
HDAC7-221ENST00000477203 TAS2R8Q9NYW2 309 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 CRIM1Q9NZV1 1036 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 PIPOXQ9P0Z9 390 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 SPRR3Q9UBC9 169 aa11.64□□□□□ -0.55
HDAC7-221ENST00000477203 ZZEF1O43149 2961 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 MPTX1A8MV57 137 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 NPY4RP50391 375 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 RBM39Q14498 530 aaKnown RBP11.63□□□□□ -0.55
HDAC7-221ENST00000477203 AVPI1Q5T686 147 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 APH1AQ96BI3 265 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 KLF13Q9Y2Y9 288 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-221ENST00000477203 TMEM14DPA8MWL7 114 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 HSPB6O14558 160 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 PPP3CBP16298 524 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 ZNF708P17019 499 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 OPRM1P35372 400 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 RRADP55042 308 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 BLOC1S1P78537 153 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 KCTD9Q7L273 389 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 KCNG3Q8TAE7 436 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 GPN1Q9HCN4 374 aaPredicted RBP11.63□□□□□ -0.55
HDAC7-221ENST00000477203 ASF1BQ9NVP2 202 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 DCAF16Q9NXF7 216 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 PLEKHA6Q9Y2H5 1048 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 NCOR2Q9Y618 2525 aa11.63□□□□□ -0.55
HDAC7-221ENST00000477203 IGKV1-27A0A075B6S5 117 aa11.62□□□□□ -0.55
HDAC7-221ENST00000477203 TRGV5A0A0B4J1U4 118 aa11.62□□□□□ -0.55
HDAC7-221ENST00000477203 A0A1B0GUH1 482 aa11.62□□□□□ -0.55
HDAC7-221ENST00000477203 UBE2QL1A1L167 161 aa11.62□□□□□ -0.55
HDAC7-221ENST00000477203 HPNP05981 417 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms