RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 MMABQ96EY8 250 aaPredicted RBP7.37□□□□□ -1.23
VAPB-205ENST00000476395 HIST1H2BLQ99880 126 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 NICN1Q9BSH3 213 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 ZNF576Q9H609 170 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 OR14J1Q9UGF5 321 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 RAB22AQ9UL26 194 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 ZNF705GA8MUZ8 300 aaPredicted RBP7.37□□□□□ -1.23
VAPB-205ENST00000476395 ZNF587BE7ETH6 402 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 SDCBPO00560 298 aaPredicted RBP7.37□□□□□ -1.23
VAPB-205ENST00000476395 MSTNO14793 375 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 SLC16A7O60669 478 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 ZNF205O95201 554 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 IGLV3-19P01714 112 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 ZNF17P17021 662 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 TMEM33P57088 247 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 C17orf82Q86X59 251 aaPredicted RBP7.37□□□□□ -1.23
VAPB-205ENST00000476395 AQP10Q96PS8 301 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 COMMD4Q9H0A8 199 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 NELFAQ9H3P2 528 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 CNTD2Q9H8S5 307 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 LMAN1LQ9HAT1 526 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 PARP11Q9NR21 331 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 FAM206AQ9NX38 181 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 HSF4Q9ULV5 492 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 ANAPC10Q9UM13 185 aa7.37□□□□□ -1.23
VAPB-205ENST00000476395 TCRBV21S2A2A0A5A6 115 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 PGA4P0DJD7 388 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 PGA5P0DJD9 388 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 GLI4P10075 376 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 HSD11B2P80365 405 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 OR9K2Q8NGE7 335 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 GPR119Q8TDV5 335 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 ANAPC16Q96DE5 110 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 NMES1Q9C002 83 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 WFDC1Q9HC57 220 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 KCNJ16Q9NPI9 418 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 GOLT1BQ9Y3E0 138 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 ASCC3Q8N3C0 2202 aaKnown RBP7.36□□□□□ -1.23
VAPB-205ENST00000476395 TRAV36DV7A0A075B6V5 113 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 E9PLN8 166 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 EFNA2O43921 213 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 CLEC3BP05452 202 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 ZNF708P17019 499 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 GLRA1P23415 457 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 FCGR2CP31995 323 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 ARRB1P49407 418 aaPredicted RBP7.36□□□□□ -1.23
VAPB-205ENST00000476395 UBE2V2Q15819 145 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 HSD17B11Q8NBQ5 300 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 OR52N5Q8NH56 324 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 SSC4DQ8WTU2 575 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 OIT3Q8WWZ8 545 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 RAB39BQ96DA2 213 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 ADAT3Q96EY9 351 aaPredicted RBP7.36□□□□□ -1.23
VAPB-205ENST00000476395 DDA1Q9BW61 102 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 TXNIPQ9H3M7 391 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 IL17BQ9UHF5 180 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 COA3Q9Y2R0 106 aaPredicted RBP7.36□□□□□ -1.23
VAPB-205ENST00000476395 EMC9Q9Y3B6 208 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 CELSR3Q9NYQ7 3312 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 ZNF724A8MTY0 619 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 AHSA1O95433 338 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 SEMA4FO95754 770 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 GZMBP10144 247 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 OR1D4P47884 311 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 RAC3P60763 192 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 NKX6-1P78426 367 aaPredicted RBP7.36□□□□□ -1.23
VAPB-205ENST00000476395 SLAQ13239 276 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 C16orf47Q6ZP98 133 aaPredicted RBP7.36□□□□□ -1.23
VAPB-205ENST00000476395 LANCL3Q6ZV70 420 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 ADGRE4PQ86SQ3 457 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 ZNF101Q8IZC7 436 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 TMEM156Q8N614 296 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 OR13C3Q8NGS6 347 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 PRRT1Q99946 306 aa7.36□□□□□ -1.23
VAPB-205ENST00000476395 LSM5Q9Y4Y9 91 aaKnown RBP7.36□□□□□ -1.23
VAPB-205ENST00000476395 LOC107986453A0A1B0GWG9 222 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 A0A1W2PP11 408 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 A0A1W2PQD3 144 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 C5orf63A6NC05 138 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 CDRT15L2A8MXV6 281 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 B4DGG1 531 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 SCDO00767 359 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 XRCC2O43543 280 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 PGA3P0DJD8 388 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 GIMD1P0DJR0 217 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 VSIG8P0DPA2 414 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 FASLGP48023 281 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 UBE2G2P60604 165 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 PLAC9Q5JTB6 97 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 PRAMEF20Q5VT98 475 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 GGNBP1Q5YKI7 109 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 C1QL4Q86Z23 238 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 OR52N4Q8NGI2 321 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 MFSD8Q8NHS3 518 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 KCNK17Q96T54 332 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 ZNF319Q9P2F9 582 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 KLHL13Q9P2N7 655 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 R4GMQ9 66 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 CEP192Q8TEP8 1941 aa7.35□□□□□ -1.23
VAPB-205ENST00000476395 RAD51DO75771 328 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms