RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 OVCH2Q7RTZ1 564 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 PEG10Q86TG7 708 aaKnown RBP18.76■□□□□ 0.59
CCM2-206ENST00000474617 MDP1Q86V88 176 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 ZNF611Q8N823 705 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 SNIP1Q8TAD8 396 aaKnown RBP18.76■□□□□ 0.59
CCM2-206ENST00000474617 CLEC4MQ9H2X3 399 aaPredicted RBP18.76■□□□□ 0.59
CCM2-206ENST00000474617 SHPKQ9UHJ6 478 aa18.76■□□□□ 0.59
CCM2-206ENST00000474617 GOSR2O14653 212 aa18.75■□□□□ 0.59
CCM2-206ENST00000474617 EFSO43281 561 aa18.75■□□□□ 0.59
CCM2-206ENST00000474617 SPRY1O43609 319 aaPredicted RBP18.75■□□□□ 0.59
CCM2-206ENST00000474617 ANGPTL7O43827 346 aa18.75■□□□□ 0.59
CCM2-206ENST00000474617 ZNF14P17017 642 aaPredicted RBP18.75■□□□□ 0.59
CCM2-206ENST00000474617 Q5BKY6 102 aa18.75■□□□□ 0.59
CCM2-206ENST00000474617 ZNF573Q86YE8 665 aa18.75■□□□□ 0.59
CCM2-206ENST00000474617 OR11H4Q8NGC9 324 aa18.75■□□□□ 0.59
CCM2-206ENST00000474617 OR5M8Q8NGP6 311 aa18.75■□□□□ 0.59
CCM2-206ENST00000474617 GPR132Q9UNW8 380 aa18.75■□□□□ 0.59
CCM2-206ENST00000474617 ST3GAL6Q9Y274 331 aa18.75■□□□□ 0.59
CCM2-206ENST00000474617 FREM1Q5H8C1 2179 aa18.75■□□□□ 0.59
CCM2-206ENST00000474617 CNOT1A5YKK6 2376 aaKnown RBP18.75■□□□□ 0.59
CCM2-206ENST00000474617 C9orf170A2RU37 121 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 OR2AT4A6NND4 320 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 FUT3P21217 361 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 IGHV1-2P23083 117 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 IL13RA1P78552 427 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 MPV17LQ2QL34 196 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 TMEM211Q6ICI0 200 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 MRGPRFQ96AM1 343 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 CMSS1Q9BQ75 279 aaKnown RBP18.74■□□□□ 0.59
CCM2-206ENST00000474617 ST6GALNAC5Q9BVH7 336 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 CHIAQ9BZP6 476 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 CDH20Q9HBT6 801 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 SPACA1Q9HBV2 294 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 PLSCR4Q9NRQ2 329 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 CACNA1GO43497 2377 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 IGKV1-12A0A0C4DH73 117 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 PLSCR5A0PG75 271 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 POM121CA8CG34 1229 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 G3V3Q6 166 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 IGKV1D-12P01611 117 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 HOXD4P09016 255 aaPredicted RBP18.74■□□□□ 0.59
CCM2-206ENST00000474617 ARPC4P59998 168 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 IKZF1Q13422 519 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 P2RY6Q15077 328 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 GABRA6Q16445 453 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 TAF9Q16594 264 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 NKAPLQ5M9Q1 402 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 MYO7BQ6PIF6 2116 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 C6orf201Q7Z4U5 140 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 FBXL14Q8N1E6 418 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 PKIBQ9C010 78 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 GPR160Q9UJ42 338 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 ANXA10Q9UJ72 324 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 OSGIN2Q9Y236 505 aa18.74■□□□□ 0.59
CCM2-206ENST00000474617 RTTNQ86VV8 2226 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 CD8AP01732 235 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 GLAP06280 429 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 CBR1P16152 277 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 NFYAP23511 347 aaPredicted RBP18.73■□□□□ 0.59
CCM2-206ENST00000474617 WNT5AP41221 380 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 H2BFSP57053 126 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 FGF12P61328 243 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 GNG3P63215 75 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 RSPO4Q2I0M5 234 aaPredicted RBP18.73■□□□□ 0.59
CCM2-206ENST00000474617 SIGIRRQ6IA17 410 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 C3P1Q6ZMU1 363 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 SLC25A26Q70HW3 274 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 FAM169BQ8N8A8 192 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 OR5P3Q8WZ94 311 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 EHFQ9NZC4 300 aa18.73■□□□□ 0.59
CCM2-206ENST00000474617 MBD3L4A6NDZ8 208 aaPredicted RBP18.72■□□□□ 0.59
CCM2-206ENST00000474617 MBD3L3A6NE82 208 aaPredicted RBP18.72■□□□□ 0.59
CCM2-206ENST00000474617 MBD3L5A6NJ08 208 aaPredicted RBP18.72■□□□□ 0.59
CCM2-206ENST00000474617 KLK10O43240 276 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 WDR1O75083 606 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 PPP3CBP16298 524 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 SDHBP21912 280 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 KIR2DL2P43627 348 aaPredicted RBP18.72■□□□□ 0.59
CCM2-206ENST00000474617 LGALSLQ3ZCW2 172 aaPredicted RBP18.72■□□□□ 0.59
CCM2-206ENST00000474617 PLEKHN1Q494U1 663 aaPredicted RBP18.72■□□□□ 0.59
CCM2-206ENST00000474617 DMRTC1Q5HYR2 192 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 Q6ZS49 121 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 OR10AD1Q8NGE0 317 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 MBD3L2Q8NHZ7 208 aaPredicted RBP18.72■□□□□ 0.59
CCM2-206ENST00000474617 HPSE2Q8WWQ2 592 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 GTF3AQ92664 365 aaKnown RBP18.72■□□□□ 0.59
CCM2-206ENST00000474617 C12orf4Q9NQ89 552 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 DECR2Q9NUI1 292 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 ZNF701Q9NV72 531 aaPredicted RBP18.72■□□□□ 0.59
CCM2-206ENST00000474617 NECAP2Q9NVZ3 263 aa18.72■□□□□ 0.59
CCM2-206ENST00000474617 TRAPPC2LH3BP13 241 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 M0R233 179 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 NGFP01138 241 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 CCL2P13500 99 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 ZNF35P13682 527 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 RAC2P15153 192 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 ZNF81P51508 661 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 PER3P56645 1201 aa18.71■□□□□ 0.59
CCM2-206ENST00000474617 CYCSP99999 105 aaKnown RBP18.71■□□□□ 0.59
CCM2-206ENST00000474617 IL24Q13007 206 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms