RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 IL13RA1P78552 427 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 MED22Q15528 200 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 Q499Y3 187 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 FIP1L1Q6UN15 594 aaKnown RBP11.83□□□□□ -0.52
BRCA1-211ENST00000472490 ZNF841Q6ZN19 808 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 ACP7Q6ZNF0 438 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 PRSS48Q7RTY5 328 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 CEP19Q96LK0 163 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 NRIP2Q9BQI9 281 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 RHOFQ9HBH0 211 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 SNTG1Q9NSN8 517 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 INSIG2Q9Y5U4 225 aa11.83□□□□□ -0.52
BRCA1-211ENST00000472490 SIRT4Q9Y6E7 314 aaPredicted RBP11.83□□□□□ -0.52
BRCA1-211ENST00000472490 DVL1O14640 695 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 PLATP00750 562 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 MAPK3P27361 379 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-211ENST00000472490 GABRA2P47869 451 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 ZNF788Q6ZQV5 615 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 SLC25A26Q70HW3 274 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 MS4A15Q8N5U1 240 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 ZFP41Q8N8Y5 198 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 PNLDC1Q8NA58 520 aaKnown RBP11.82□□□□□ -0.52
BRCA1-211ENST00000472490 OR5T2Q8NGG2 359 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 ANGPTL6Q8NI99 470 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 NANPQ8TBE9 248 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 SEH1LQ96EE3 360 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 PGLYRP3Q96LB9 341 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 CCL13Q99616 98 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 PAK1IP1Q9NWT1 392 aaPredicted RBP11.82□□□□□ -0.52
BRCA1-211ENST00000472490 CTSZQ9UBR2 303 aa11.82□□□□□ -0.52
BRCA1-211ENST00000472490 HIVEP2P31629 2446 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 IGKV1-27A0A075B6S5 117 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 IGHV2-70DA0A0C4DH43 119 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 KIR2DS1A0A191URI9 304 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 PNMA8CA0A1B0GUJ8 204 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 TRAPPC2LH3BP13 241 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 SIGLEC5O15389 551 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 MRPS14O60783 128 aaKnown RBP11.81□□□□□ -0.52
BRCA1-211ENST00000472490 KNG1P01042 644 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 PSG2P11465 335 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 POU3F4P49335 361 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 PDZK1IP1Q13113 114 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 GPR50Q13585 617 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 KISS1Q15726 138 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 ZNF561Q8N587 486 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 ZSCAN4Q8NAM6 433 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-211ENST00000472490 ST8SIA4Q92187 359 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 RGP1Q92546 391 aaPredicted RBP11.81□□□□□ -0.52
BRCA1-211ENST00000472490 DMRTB1Q96MA1 342 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 NUDT16L1Q9BRJ7 211 aaKnown RBP11.81□□□□□ -0.52
BRCA1-211ENST00000472490 TMPRSS13Q9BYE2 586 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 YTHDF1Q9BYJ9 559 aaKnown RBP11.81□□□□□ -0.52
BRCA1-211ENST00000472490 HES4Q9HCC6 221 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 TMEM138Q9NPI0 162 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 MMP26Q9NRE1 261 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 GLS2Q9UI32 602 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 AUP1Q9Y679 476 aa11.81□□□□□ -0.52
BRCA1-211ENST00000472490 TRBV5-5A0A0J9YX44 114 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 RFPL4AA6NLU0 287 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 RFPL4AL1F8VTS6 287 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 ALDOBP05062 364 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 PPIAL4GP0DN37 164 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 PRDX2P32119 198 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 CAV3P56539 151 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 GABARAPL2P60520 117 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 ERVK11-1P61568 191 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 PAX2Q02962 417 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 IKZF1Q13422 519 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 IRF3Q14653 427 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 ZNF529Q6P280 563 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 BTN2A1Q7KYR7 527 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 SAXO1Q8IYX7 474 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 FAM216BQ8N7L0 139 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 UFD1Q92890 307 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 SLAMF9Q96A28 289 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 SDSLQ96GA7 329 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 POM121Q96HA1 1249 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 ZNF488Q96MN9 340 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 GPER1Q99527 375 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 SMURF1Q9HCE7 757 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 ISYNA1Q9NPH2 558 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 TAS2R4Q9NYW5 299 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 MTCH1Q9NZJ7 389 aa11.8□□□□□ -0.52
BRCA1-211ENST00000472490 SLC25A10Q9UBX3 287 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-211ENST00000472490 IGKV1D-17A0A075B6S4 117 aa11.79□□□□□ -0.52
BRCA1-211ENST00000472490 ZNF879B4DU55 563 aa11.79□□□□□ -0.52
BRCA1-211ENST00000472490 TMEM225BP0DP42 221 aa11.79□□□□□ -0.52
BRCA1-211ENST00000472490 BMXP51813 675 aa11.79□□□□□ -0.52
BRCA1-211ENST00000472490 RPS11P62280 158 aaKnown RBP eCLIP11.79□□□□□ -0.52
BRCA1-211ENST00000472490 PAX8Q06710 450 aa11.79□□□□□ -0.52
BRCA1-211ENST00000472490 IL17RELQ6ZVW7 336 aa11.79□□□□□ -0.52
BRCA1-211ENST00000472490 SGCDQ92629 289 aa11.79□□□□□ -0.52
BRCA1-211ENST00000472490 EMG1Q92979 244 aaKnown RBP11.79□□□□□ -0.52
BRCA1-211ENST00000472490 GAFA1Q96PS6 74 aa11.79□□□□□ -0.52
BRCA1-211ENST00000472490 OR5M11Q96RB7 305 aa11.79□□□□□ -0.52
BRCA1-211ENST00000472490 LSM2Q9Y333 95 aaKnown RBP11.79□□□□□ -0.52
BRCA1-211ENST00000472490 SPRY1O43609 319 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-211ENST00000472490 GPX5O75715 221 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 CHRM2P08172 466 aa11.78□□□□□ -0.52
BRCA1-211ENST00000472490 HSMCR30P0CW71 290 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms