RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ERVK11-1P61568 191 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 ZNF529Q6P280 563 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 BTNL3Q6UXE8 466 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 ZNF788Q6ZQV5 615 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 MKXQ8IYA7 352 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 OR5T2Q8NGG2 359 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 DACT3Q96B18 629 aaPredicted RBP12.71□□□□□ -0.37
SDC3-203ENST00000471567 C7orf69Q9H7B7 122 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 HES4Q9HCC6 221 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 SNTG1Q9NSN8 517 aa12.71□□□□□ -0.37
SDC3-203ENST00000471567 NAV3Q8IVL0 2385 aa12.71□□□□□ -0.38
SDC3-203ENST00000471567 ARHGAP32A7KAX9 2087 aa12.71□□□□□ -0.38
SDC3-203ENST00000471567 ZFHX3Q15911 3703 aa12.71□□□□□ -0.38
SDC3-203ENST00000471567 IGHV2-70DA0A0C4DH43 119 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 TRBV5-5A0A0J9YX44 114 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 KIR2DS1A0A191URI9 304 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 NDUFB3O43676 98 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 NXPH2O95156 264 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 ECDO95905 644 aaPredicted RBP12.7□□□□□ -0.38
SDC3-203ENST00000471567 CYB5AP00167 134 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 PSG2P11465 335 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 SRD5A1P18405 259 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 CELP19835 753 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 RAB3AP20336 220 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 SOX2P48431 317 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 PAX8Q06710 450 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 SPHARQ15513 63 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 Q499Y3 187 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 SLC25A26Q70HW3 274 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 PRSS48Q7RTY5 328 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 Q8IYB0 196 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 ZFP41Q8N8Y5 198 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 SGCDQ92629 289 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 TMEM106AQ96A25 262 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 CEP19Q96LK0 163 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 ZNF488Q96MN9 340 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 SMURF1Q9HCE7 757 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 MTCH1Q9NZJ7 389 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 ZNF222Q9UK12 451 aa12.7□□□□□ -0.38
SDC3-203ENST00000471567 LSM2Q9Y333 95 aaKnown RBP12.7□□□□□ -0.38
SDC3-203ENST00000471567 ANK3Q12955 4377 aaKnown RBP12.69□□□□□ -0.38
SDC3-203ENST00000471567 IGKV1D-17A0A075B6S4 117 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 SIGLEC5O15389 551 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 ENSAO43768 121 aaKnown RBP12.69□□□□□ -0.38
SDC3-203ENST00000471567 AVPP01185 164 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 LIPFP07098 398 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 SRP14P37108 136 aaKnown RBP12.69□□□□□ -0.38
SDC3-203ENST00000471567 GABRA2P47869 451 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 RPS11P62280 158 aaKnown RBP eCLIP12.69□□□□□ -0.38
SDC3-203ENST00000471567 IL13RA1P78552 427 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 PDZK1IP1Q13113 114 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 GPR50Q13585 617 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 LRRC10Q5BKY1 277 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 IL17RELQ6ZVW7 336 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 FAM216BQ8N7L0 139 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 THRSPQ92748 146 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 CPNE2Q96FN4 548 aaPredicted RBP12.69□□□□□ -0.38
SDC3-203ENST00000471567 SDSLQ96GA7 329 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 DMRTB1Q96MA1 342 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 GAFA1Q96PS6 74 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 NUDT16L1Q9BRJ7 211 aaKnown RBP12.69□□□□□ -0.38
SDC3-203ENST00000471567 MRI1Q9BV20 369 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 OPN4Q9UHM6 478 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 AUP1Q9Y679 476 aa12.69□□□□□ -0.38
SDC3-203ENST00000471567 RFPL4AA6NLU0 287 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 C22orf46C9J442 243 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 RFPL4AL1F8VTS6 287 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 MAGEB3O15480 346 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 MRPS14O60783 128 aaKnown RBP12.68□□□□□ -0.38
SDC3-203ENST00000471567 FCN3O75636 299 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 GPX5O75715 221 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 PLATP00750 562 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 KNG1P01042 644 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 IFNA2P01563 188 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 ALDOBP05062 364 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 HCKP08631 526 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 PPIAL4GP0DN37 164 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 POU3F4P49335 361 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 DOC2BQ14184 412 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 MED22Q15528 200 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 KISS1Q15726 138 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 ASPHD2Q6ICH7 369 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 C1orf229Q6ZS94 237 aaPredicted RBP12.68□□□□□ -0.38
SDC3-203ENST00000471567 C1QL2Q7Z5L3 287 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 SAXO1Q8IYX7 474 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 MS4A15Q8N5U1 240 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 ZSCAN4Q8NAM6 433 aaPredicted RBP12.68□□□□□ -0.38
SDC3-203ENST00000471567 OR13C5Q8NGS8 318 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 ST8SIA4Q92187 359 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 SLAMF9Q96A28 289 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 OR5M11Q96RB7 305 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 YTHDF1Q9BYJ9 559 aaKnown RBP12.68□□□□□ -0.38
SDC3-203ENST00000471567 CCDC90BQ9GZT6 254 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 SEBOXQ9HB31 216 aaPredicted RBP12.68□□□□□ -0.38
SDC3-203ENST00000471567 RHOFQ9HBH0 211 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 ISYNA1Q9NPH2 558 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 TAS2R4Q9NYW5 299 aa12.68□□□□□ -0.38
SDC3-203ENST00000471567 TRBV5-7A0A0A0MS05 114 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 PNMA8CA0A1B0GUJ8 204 aa12.67□□□□□ -0.38
SDC3-203ENST00000471567 A0A1B0GW55 424 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms