RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 XPO6Q96QU8 1125 aaKnown RBP0.32□□□□□ -2.36
UBXN4-207ENST00000471246 KRTAP2-4Q9BYR9 128 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 UCK2Q9BZX2 261 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 API5Q9BZZ5 524 aaKnown RBP0.32□□□□□ -2.36
UBXN4-207ENST00000471246 ZYG11BQ9C0D3 744 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 ANKRA2Q9H9E1 313 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 RDH14Q9HBH5 336 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF286AQ9HBT8 521 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 HEBP1Q9NRV9 189 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 PITPNC1Q9UKF7 332 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 ICOSQ9Y6W8 199 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 SPENQ96T58 3664 aaKnown RBP0.32□□□□□ -2.36
UBXN4-207ENST00000471246 MUC12Q9UKN1 5478 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 MIA3Q5JRA6 1907 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 AK9Q5TCS8 1911 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 SHANK3Q9BYB0 1731 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 CSMD2Q7Z408 3487 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 ASXL3Q9C0F0 2248 aa0.32□□□□□ -2.36
UBXN4-207ENST00000471246 FAT3Q8TDW7 4589 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 NESP48681 1621 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 APC2O95996 2303 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 CNTRLQ7Z7A1 2325 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 PTPRQQ9UMZ3 2332 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 PPRC1Q5VV67 1664 aaKnown RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF469Q96JG9 3925 aaPredicted RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RALGAPBQ86X10 1494 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 SHANK2Q9UPX8 1470 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ADGRG4Q8IZF6 3080 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 DNAH7Q8WXX0 4024 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 A0A0G2JMP0 313 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TRBV11-1A0A0K0K1C0 115 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 A0A0X1KG70 313 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 A0A1B0GU33 70 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TSPAN11A1L157 253 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF729A6NN14 1252 aaPredicted RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 C9JVG2 144 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 G3V3Q6 166 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 LSM1O15116 133 aaKnown RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RNF13O43567 381 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 CD160O95971 181 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 OXTP01178 125 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 FTH1P02794 183 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TRGV3P03979 118 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 MYL2P10916 166 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RAB5AP20339 215 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TEAD1P28347 426 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 SLC6A1P30531 599 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 GNRHRP30968 328 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RFC3P40938 356 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TUFMP49411 452 aaKnown RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 SERPINB8P50452 374 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 CCL23P55773 120 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF33AQ06730 810 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 INCA1Q0VD86 236 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ADIGQ0VDE8 80 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TRMT5Q32P41 509 aaKnown RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 HSDL1Q3SXM5 330 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 PRAMEF20Q5VT98 475 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 STEAP4Q687X5 459 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 OR2T5Q6IEZ7 315 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF322Q6U7Q0 402 aaPredicted RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 COMTD1Q86VU5 262 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RAB43Q86YS6 212 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 SLC30A8Q8IWU4 369 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TBC1D21Q8IYX1 336 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 VKORC1L1Q8N0U8 176 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF567Q8N184 647 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RPRMLQ8N4K4 120 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 OR2M7Q8NG81 312 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 OR2T29Q8NH02 315 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RNASE11Q8TAA1 199 aaKnown RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 FAM57AQ8TBR7 257 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RXFP2Q8WXD0 754 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RAB1CQ92928 201 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RAD51AP1Q96B01 352 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 PPP1R36Q96LQ0 422 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RDH12Q96NR8 316 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TRIB3Q96RU7 358 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 NUP58Q9BVL2 599 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 CALN1Q9BXU9 219 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 FANCEQ9HB96 536 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TMEM38BQ9NVV0 291 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 DDX19BQ9UMR2 479 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ZNF443Q9Y2A4 671 aaPredicted RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 RCL1Q9Y2P8 373 aaKnown RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ASB3Q9Y575 518 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TRAPPC1Q9Y5R8 145 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 MED13LQ71F56 2210 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TOPBP1Q92547 1522 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ABCA4P78363 2273 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 ELP1O95163 1332 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 UBN2Q6ZU65 1347 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 MROH5Q6ZUA9 1318 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 TMEM131Q92545 1883 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 CICQ96RK0 1608 aaPredicted RBP0.31□□□□□ -2.36
UBXN4-207ENST00000471246 CC2D2AQ9P2K1 1620 aa0.31□□□□□ -2.36
UBXN4-207ENST00000471246 LCTP09848 1927 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 KDM5AP29375 1690 aaKnown RBP0.3□□□□□ -2.36
UBXN4-207ENST00000471246 CRB1P82279 1406 aa0.3□□□□□ -2.36
UBXN4-207ENST00000471246 LAMA1P25391 3075 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms