RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 C2orf54Q08AI8 447 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RIPPLY1Q0D2K3 151 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 MERTKQ12866 999 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 MRPL28Q13084 256 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 STX5Q13190 355 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CRMP1Q14194 572 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 QPRTQ15274 297 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RCN1Q15293 331 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TSC22D1Q15714 1073 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 LTB4RQ15722 352 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 GABRA6Q16445 453 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 NNATQ16517 81 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CYP51A1Q16850 503 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TMEM249Q2WGJ8 235 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 PGGHGQ32M88 737 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 LINC01620Q4KN68 170 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 EMBQ6PCB8 327 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 KCNIP4Q6PIL6 250 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF841Q6ZN19 808 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 LRRC74BQ6ZQY2 392 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CCDC80Q76M96 950 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 C6orf120Q7Z4R8 191 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 GALNT10Q86SR1 603 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 MOB3BQ86TA1 216 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RIMKLAQ8IXN7 391 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF786Q8N393 782 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RNF175Q8N4F7 328 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 DHRSXQ8N5I4 330 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF433Q8N7K0 673 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 MFSD8Q8NHS3 518 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 SGMS2Q8NHU3 365 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF563Q8TA94 476 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RFESDQ8TAC1 157 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CNIH3Q8TBE1 160 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RAB3IL1Q8TBN0 382 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 FNDC8Q8TC99 324 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 DNAJA4Q8WW22 397 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 DNAJA3Q96EY1 480 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CHMP6Q96FZ7 201 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 SLC41A3Q96GZ6 507 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 LINC00479Q96M42 142 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RNF145Q96MT1 663 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TSSK3Q96PN8 268 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 OPRPNQ99935 248 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TMEM109Q9BVC6 243 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TAPBPLQ9BX59 468 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 DPY30Q9C005 99 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 PARLQ9H300 379 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 C1orf198Q9H425 327 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TUBB1Q9H4B7 451 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF442Q9H7R0 627 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 FN3KRPQ9HA64 309 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 NTN4Q9HB63 628 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 PIPOXQ9P0Z9 390 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 STX18Q9P2W9 335 aaKnown RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 BTNL2Q9UIR0 455 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 RASD1Q9Y272 281 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 CAB39Q9Y376 341 aaPredicted RBP2.05□□□□□ -2.08
UBXN4-206ENST00000470687 MOB4Q9Y3A3 225 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 TIMM22Q9Y584 194 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 SLC25A15Q9Y619 301 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 GMEB1Q9Y692 573 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 LRBAP50851 2863 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 BSNQ9UPA5 3926 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 USF3Q68DE3 2245 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 ROS1P08922 2347 aa2.05□□□□□ -2.08
UBXN4-206ENST00000470687 PPIAL4EA0A075B759 164 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 IGHV3OR16-10A0A075B7F0 116 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 TRAV26-1A0A087WT03 109 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 XKRY2A2RUG3 117 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 GMNCA6NCL1 334 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 PRORSD1PA6NEY8 169 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 HELTA6NFD8 242 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF716A6NP11 495 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 SHISA9B4DS77 424 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 J3QLI3 93 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 UBFD1O14562 309 aaKnown RBP2.04□□□□□ -2.08
UBXN4-206ENST00000470687 TCF21O43680 179 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 EFNA2O43921 213 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 VENTXO95231 258 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 FARS2O95363 451 aaKnown RBP2.04□□□□□ -2.08
UBXN4-206ENST00000470687 FSTL3O95633 263 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 IGF2P01344 180 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 IGKV1D-16P01601 117 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 IGKV3-15P01624 115 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 CD8AP01732 235 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 SOD3P08294 240 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 TACSTD2P09758 323 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 TFPTP0C1Z6 253 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 LINC00032P0C843 101 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 PPIAL4FP0DN26 164 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 LAMP1P11279 417 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 IDO1P14902 403 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 ETS2P15036 469 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 CBR1P16152 277 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 ZNF43P17038 809 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 NPR2P20594 1047 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 SERPINA2P20848 420 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 IGHV1-2P23083 117 aa2.04□□□□□ -2.08
UBXN4-206ENST00000470687 S100A3P33764 101 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms