RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 EIF2AK4Q9P2K8 1649 aaKnown RBP4.46□□□□□ -1.69
COL3A1-205ENST00000470167 CROCCQ5TZA2 2017 aa4.46□□□□□ -1.69
COL3A1-205ENST00000470167 CACNA1SQ13698 1873 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 A0A087WWC5 75 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 KIR2DS5A0A0G2JLQ3 304 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 A0A0G2JMM0 328 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 A0A0G2JNG1 304 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 A0A1B0GX51 115 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 A0A1W2PPB8 328 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 A0A1W2PRD5 423 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 KIR3DP1A8MWS1 328 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 B5MCH6 92 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 F5H6K3 240 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 F2RL2O00254 374 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF195O14628 629 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 HMGB3O15347 200 aaKnown RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 FCGR3BO75015 233 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 MT-CO3P00414 261 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 HLA-HP01893 362 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 KLK1P06870 262 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 FTH1P19P0C7X4 201 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 PGA3P0DJD8 388 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 ATP1B2P14415 290 aaPredicted RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 MMP9P14780 707 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 GNB3P16520 340 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 TNFRSF1BP20333 461 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 CSRP1P21291 193 aaKnown RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 NPY1RP25929 384 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 SRIP30626 198 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 GSK3BP49841 420 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 SULT1A1P50225 295 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 SULT1A2P50226 295 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF133P52736 654 aaPredicted RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 LBX1P52954 281 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 OR12D2P58182 307 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 RPS28P62857 69 aaKnown RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 HIST1H1AQ02539 215 aaPredicted RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 DLX2Q07687 328 aaPredicted RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF266Q14584 549 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF345Q14585 488 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 KIR2DS5Q14953 304 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 MAD2L1BPQ15013 274 aaPredicted RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 RGNQ15493 299 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 SNRNP35Q16560 246 aaKnown RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 GSG1Q2KHT4 349 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 BCL2L15Q5TBC7 163 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 PMS2CLQ68D20 193 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 RTL6Q6ICC9 239 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 OR2T2Q6IF00 324 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 GRHL2Q6ISB3 625 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 UFSP1Q6NVU6 142 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 APOOLQ6UXV4 268 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 LINC00336Q6ZUF6 198 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 MON1BQ7L1V2 547 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 MEPCEQ7L2J0 689 aaKnown RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 ASCL5Q7RTU5 278 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 TMPRSS11BQ86T26 416 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 MUC15Q8N387 334 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 FAM24BQ8N5W8 94 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 POC1AQ8NBT0 407 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 NOXO1Q8NFA2 376 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 OR5AP2Q8NGF4 316 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 OR5D16Q8NGK9 328 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 OR1B1Q8NGR6 318 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 OR4A16Q8NH70 328 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 HMGCLL1Q8TB92 370 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 SFXN5Q8TD22 340 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 WBP2Q969T9 261 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM18Q96B42 140 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 FGGYQ96C11 551 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 MUCL1Q96DR8 90 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 ACY3Q96HD9 319 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 GRAMD2BQ96HH9 432 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF419Q96HQ0 510 aaPredicted RBP4.46□□□□□ -1.7
COL3A1-205ENST00000470167 TRIB3Q96RU7 358 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 PEBP4Q96S96 227 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 TBX15Q96SF7 602 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 GPR22Q99680 433 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 HSPB9Q9BQS6 159 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 NUDT22Q9BRQ3 303 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 OR11A1Q9GZK7 315 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 CTDSP1Q9GZU7 261 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM133Q9H2Q1 129 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 CDCP1Q9H5V8 836 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 RPS10P5Q9NQ39 176 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 GPR84Q9NQS5 396 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 OR1A1Q9P1Q5 309 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF319Q9P2F9 582 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 SLC7A7Q9UM01 511 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 PHLPP1O60346 1717 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 SHANK3Q9BYB0 1731 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 MYO3AQ8NEV4 1616 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 NEXMIFQ5QGS0 1516 aa4.46□□□□□ -1.7
COL3A1-205ENST00000470167 MYH14Q7Z406 1995 aaKnown RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 CLTCQ00610 1675 aaKnown RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 ASPDHA6ND91 283 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 MYADML2A6NDP7 307 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 MSGN1A6NI15 193 aa4.45□□□□□ -1.7
COL3A1-205ENST00000470167 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
COL3A1-205ENST00000470167 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms