RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 SLC36A1Q7Z2H8 476 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 BIVMQ86UB2 503 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 SATL1Q86VE3 508 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 Q8NFD4 153 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 CLDND2Q8NHS1 167 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 NPRL2Q8WTW4 380 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 MRPS24Q96EL2 167 aaKnown RBP10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 DMRTB1Q96MA1 342 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 S100A13Q99584 98 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 TMEM246Q9BRR3 403 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 MRPS26Q9BYN8 205 aaKnown RBP10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 METTL17Q9H7H0 456 aaPredicted RBP10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 ZNF665Q9H7R5 613 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 IL36GQ9NZH8 169 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 NLKQ9UBE8 527 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 GLS2Q9UI32 602 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 AKAP9Q99996 3911 aa10.58□□□□□ -0.72
SPTLC1-204ENST00000469778 TRAV8-7A0A075B6U6 113 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 PPIAL4CA0A0B4J2A2 164 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 OR2AT4A6NND4 320 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 PDCD5O14737 125 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 AKR7A2O43488 359 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 FOXH1O75593 365 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 RHBDL1O75783 438 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 KDM4BO94953 1096 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 KNG1P01042 644 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 IGHV2-5P01817 119 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 UBBP0CG47 229 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 MTNR1BP49286 362 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 GP2P55259 537 aaKnown RBP10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 TMEM249Q2WGJ8 235 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 SPIN3Q5JUX0 258 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 CYB5R2Q6BCY4 276 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 ACP7Q6ZNF0 438 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 TPRA1Q86W33 373 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 OR52N4Q8NGI2 321 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 OR51A2Q8NGJ7 313 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 NEIL1Q96FI4 390 aaPredicted RBP10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 DCAF16Q9NXF7 216 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 MTCH1Q9NZJ7 389 aa10.57□□□□□ -0.72
SPTLC1-204ENST00000469778 A0A1W2PPK0 400 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 NKX6-3A6NJ46 265 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 CEACAM18A8MTB9 384 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 F5H0A9 414 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 C3orf80F5H4A9 247 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 SYNGR1O43759 233 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 TMEM127O75204 238 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 ECDO95905 644 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 CD36P16671 472 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 GATA3P23771 443 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 MYL9P24844 172 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 ZP1P60852 638 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 ESCO2Q56NI9 601 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 DMRTC1Q5HYR2 192 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 C1orf100Q5SVJ3 147 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 CD276Q5ZPR3 534 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 STUMQ69YW2 141 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 FAM58AQ8N1B3 248 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 BOLLQ8N9W6 283 aaKnown RBP10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 LINC01356Q8N9X3 169 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 DEFB108BQ8NET1 73 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 OR8B3Q8NGG8 313 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 ANGPTL6Q8NI99 470 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 TNFAIP8L1Q8WVP5 186 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 SDSLQ96GA7 329 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 OR8B2Q96RD0 313 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 METTL9Q9H1A3 318 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 SMURF1Q9HCE7 757 aa10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 POLR3KQ9Y2Y1 108 aaPredicted RBP10.56□□□□□ -0.72
SPTLC1-204ENST00000469778 TRAV20A0A0B4J274 112 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 A8MXK9 166 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 MAS1P04201 325 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 CHRM2P08172 466 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 RPS2P15880 293 aaKnown RBP10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 EGR1P18146 543 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 CALRP27797 417 aaKnown RBP10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 POU3F4P49335 361 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 ZNF146Q15072 292 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 RSU1Q15404 277 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 SFRP4Q6FHJ7 346 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 ZNF788Q6ZQV5 615 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 LRRTM1Q86UE6 522 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 LYPD6Q86Y78 171 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 ZNF561Q8N587 486 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 JAGN1Q8N5M9 183 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 TBC1D15Q8TC07 691 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 KCTD7Q96MP8 289 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 FAM234AQ9H0X4 552 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 WDR13Q9H1Z4 485 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 HMG20AQ9NP66 347 aa10.55□□□□□ -0.72
SPTLC1-204ENST00000469778 SH2D1BO14796 132 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 WNT9BO14905 357 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 TMPRSS2O15393 492 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 ADAM20O43506 726 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 NDUFB3O43676 98 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 CSTBP04080 98 aaKnown RBP10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 LIPFP07098 398 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 MSMBP08118 114 aa10.54□□□□□ -0.72
SPTLC1-204ENST00000469778 PSG2P11465 335 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms