RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 RAB1BQ9H0U4 201 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 MYEF2Q9P2K5 600 aaKnown RBP15.01□□□□□ -0.01
MRPL28-208ENST00000469744 FBLN5Q9UBX5 448 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 MTFP1Q9UDX5 166 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 N6AMT1Q9Y5N5 214 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 MALRD1Q5VYJ5 2156 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 VWC2LB2RUY7 222 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 RER1O15258 196 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 RBBP9O75884 186 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 IGLV3-1P01715 115 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 ALDOBP05062 364 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 H2AFB2P0C5Z0 115 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 GLRXP35754 106 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 OR8B12Q8NGG6 310 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 OR51A2Q8NGJ7 313 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 OR1J2Q8NGS2 313 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 ZNF486Q96H40 463 aaPredicted RBP15.01□□□□□ -0.01
MRPL28-208ENST00000469744 GHITMQ9H3K2 345 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 METTL17Q9H7H0 456 aaPredicted RBP15.01□□□□□ -0.01
MRPL28-208ENST00000469744 SCPEP1Q9HB40 452 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 ATRQ13535 2644 aa15.01□□□□□ -0.01
MRPL28-208ENST00000469744 LYNX1G3V0Z9 82 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 PRAF2O60831 178 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 SCGNO76038 276 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 BPNT1O95861 308 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 CST2P09228 141 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 MMP7P09237 267 aaPredicted RBP15□□□□□ -0.01
MRPL28-208ENST00000469744 LYNX1P0DP58 116 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 DAOP14920 347 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 ZNF20P17024 532 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 RAB3AP20336 220 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 OTX1P32242 354 aaPredicted RBP15□□□□□ -0.01
MRPL28-208ENST00000469744 FAUP35544 74 aaKnown RBP15□□□□□ -0.01
MRPL28-208ENST00000469744 ALDH3B1P43353 468 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 PRKXP51817 358 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 ERVS71-1P61550 626 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 PLA2G7Q13093 441 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 RAB12Q6IQ22 244 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 ZNF283Q8N7M2 679 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 ADAT3Q96EY9 351 aaPredicted RBP15□□□□□ -0.01
MRPL28-208ENST00000469744 NUDT16L1Q9BRJ7 211 aaKnown RBP15□□□□□ -0.01
MRPL28-208ENST00000469744 BPESC1Q9GZL8 116 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 CDH20Q9HBT6 801 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 NUDT15Q9NV35 164 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 ING3Q9NXR8 418 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 ZNF107Q9UII5 783 aaPredicted RBP15□□□□□ -0.01
MRPL28-208ENST00000469744 DUSP13Q9UII6 198 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 RAB22AQ9UL26 194 aa15□□□□□ -0.01
MRPL28-208ENST00000469744 IGHV4-61A0A0C4DH41 118 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 A0A0U1RQV5 110 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 A8MV72 311 aaPredicted RBP14.99□□□□□ -0.01
MRPL28-208ENST00000469744 M0R233 179 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 SYNGR3O43761 229 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 LMX1BO60663 402 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 MT-ND4P03905 459 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 CSF1P09603 554 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 IGHV4-31P0DP07 118 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 ZNF16P17020 682 aaPredicted RBP14.99□□□□□ -0.01
MRPL28-208ENST00000469744 PRSS3P35030 304 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 EFNB2P52799 333 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 RPS23P62266 143 aaKnown RBP14.99□□□□□ -0.01
MRPL28-208ENST00000469744 ECH1Q13011 328 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 ALKBH6Q3KRA9 238 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 NRN1LQ496H8 165 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 CCDC92Q53HC0 331 aaPredicted RBP14.99□□□□□ -0.01
MRPL28-208ENST00000469744 PABPC1L2AQ5JQF8 200 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 JAGN1Q8N5M9 183 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 CPEB3Q8NE35 698 aaKnown RBP14.99□□□□□ -0.01
MRPL28-208ENST00000469744 OR51E1Q8TCB6 317 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 C10orf35Q96D05 121 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 ATG5Q9H1Y0 275 aa14.99□□□□□ -0.01
MRPL28-208ENST00000469744 CGGBP1Q9UFW8 167 aaPredicted RBP14.99□□□□□ -0.01
MRPL28-208ENST00000469744 TRAV18A0A075B6X5 111 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 A0A0A6YYJ9 748 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 NDUFS8O00217 210 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 ALX3O95076 343 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 ZNF32P17041 273 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 GSK3AP49840 483 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 PLP2Q04941 152 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 TBC1D28Q2M2D7 210 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 CD276Q5ZPR3 534 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 DPPA2Q7Z7J5 298 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 AKR7LQ8NHP1 331 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 NEU4Q8WWR8 484 aaPredicted RBP14.98□□□□□ -0.01
MRPL28-208ENST00000469744 RANGRFQ9HD47 186 aaPredicted RBP14.98□□□□□ -0.01
MRPL28-208ENST00000469744 MYOZ1Q9NP98 299 aaPredicted RBP14.98□□□□□ -0.01
MRPL28-208ENST00000469744 GPR84Q9NQS5 396 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 KLK11Q9UBX7 282 aa14.98□□□□□ -0.01
MRPL28-208ENST00000469744 FBXO9Q9UK97 447 aaPredicted RBP14.98□□□□□ -0.01
MRPL28-208ENST00000469744 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.97□□□□□ -0.012e-7■■□□□ 14.2
MRPL28-208ENST00000469744 TRAV6A0A075B6T7 132 aa14.97□□□□□ -0.01
MRPL28-208ENST00000469744 METTL21EPA6NDL7 271 aa14.97□□□□□ -0.01
MRPL28-208ENST00000469744 CCNOP22674 350 aa14.97□□□□□ -0.01
MRPL28-208ENST00000469744 GNALP38405 381 aa14.97□□□□□ -0.01
MRPL28-208ENST00000469744 MECP2P51608 486 aaKnown RBP14.97□□□□□ -0.01
MRPL28-208ENST00000469744 CCR6P51684 374 aa14.97□□□□□ -0.01
MRPL28-208ENST00000469744 MAB21L1Q13394 359 aa14.97□□□□□ -0.01
MRPL28-208ENST00000469744 RGS7BPQ6MZT1 257 aaPredicted RBP14.97□□□□□ -0.01
MRPL28-208ENST00000469744 NOXA1Q86UR1 476 aa14.97□□□□□ -0.01
MRPL28-208ENST00000469744 OR14K1Q8NGZ2 314 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms