RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 MUC1P15941 1255 aaPredicted RBP12.77□□□□□ -0.37
SNIP1-202ENST00000468040 SLC25A16P16260 332 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 EGR1P18146 543 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 MDH2P40926 338 aaKnown RBP12.77□□□□□ -0.37
SNIP1-202ENST00000468040 ERVK11-1P61568 191 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 HNRNPA0Q13151 305 aaKnown RBP12.77□□□□□ -0.37
SNIP1-202ENST00000468040 GPR176Q14439 515 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 RSU1Q15404 277 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 CTF1Q16619 201 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 MICBQ29980 383 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 SMIM21Q3B7S5 101 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 C1orf100Q5SVJ3 147 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 TEX36Q5VZQ5 186 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 AWAT2Q6E213 333 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 ASCL4Q6XD76 172 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 FAM90A1Q86YD7 464 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 KRTAP1-3Q8IUG1 177 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 MUC20Q8N307 709 aaPredicted RBP12.77□□□□□ -0.37
SNIP1-202ENST00000468040 OR4D6Q8NGJ1 314 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 TBC1D15Q8TC07 691 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 C12orf43Q96C57 262 aaKnown RBP12.77□□□□□ -0.37
SNIP1-202ENST00000468040 GFI1Q99684 422 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 BPESC1Q9GZL8 116 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 NAA50Q9GZZ1 169 aaKnown RBP12.77□□□□□ -0.37
SNIP1-202ENST00000468040 METTL9Q9H1A3 318 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 ELL3Q9HB65 397 aaPredicted RBP12.77□□□□□ -0.37
SNIP1-202ENST00000468040 HES4Q9HCC6 221 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 PCDHB16Q9NRJ7 776 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 DNAJB11Q9UBS4 358 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 ITPR2Q14571 2701 aa12.77□□□□□ -0.37
SNIP1-202ENST00000468040 IGHV4-30-2A0A087WSY4 118 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 IGKV1-12A0A0C4DH73 117 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 ISPDA4D126 451 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 NOTOA8MTQ0 251 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 VWC2LB2RUY7 222 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 C3orf80F5H4A9 247 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.76□□□□□ -0.37
SNIP1-202ENST00000468040 SLC22A1O15245 554 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 CDRT1O95170 752 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 IL1AP01583 271 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 IGKV1D-12P01611 117 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 UBBP0CG47 229 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 BCL3P20749 454 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 CFPP27918 469 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 HTR2CP28335 458 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 CD80P33681 288 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 NR4A2P43354 598 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 OR10A3P58181 314 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 GMFBP60983 142 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 VBP1P61758 197 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 NCS1P62166 190 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 ZMYND11Q15326 602 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 TMEM155Q4W5P6 130 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 FAM201AQ5SY85 155 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 AVPI1Q5T686 147 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 FIP1L1Q6UN15 594 aaKnown RBP12.76□□□□□ -0.37
SNIP1-202ENST00000468040 LRRC28Q86X40 367 aaPredicted RBP12.76□□□□□ -0.37
SNIP1-202ENST00000468040 SPICQ8N5J4 248 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 ZNF488Q96MN9 340 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 NKX3-1Q99801 234 aaPredicted RBP12.76□□□□□ -0.37
SNIP1-202ENST00000468040 IL36GQ9NZH8 169 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 ITGB1BP2Q9UKP3 347 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 ING4Q9UNL4 249 aa12.76□□□□□ -0.37
SNIP1-202ENST00000468040 PDZD2O15018 2839 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 IFITM5A6NNB3 132 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 AIPO00170 330 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 WNT9BO14905 357 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 NDUFA2O43678 99 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 ZNF205O95201 554 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 CSTBP04080 98 aaKnown RBP12.75□□□□□ -0.37
SNIP1-202ENST00000468040 RBMXP38159 391 aaKnown RBP12.75□□□□□ -0.37
SNIP1-202ENST00000468040 NPBWR2P48146 333 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 CAPZA1P52907 286 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 MXD1Q05195 221 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 RAB11BQ15907 218 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 ZNF404Q494X3 552 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 SFRP4Q6FHJ7 346 aaPredicted RBP12.75□□□□□ -0.37
SNIP1-202ENST00000468040 ELP2Q6IA86 826 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 GLIPR1L1Q6UWM5 242 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 ACP7Q6ZNF0 438 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 C1QL2Q7Z5L3 287 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 CROCCP3Q8IVE0 287 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 EMG1Q92979 244 aaKnown RBP12.75□□□□□ -0.37
SNIP1-202ENST00000468040 Q96MF0 132 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 WDR13Q9H1Z4 485 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 RBFOX1Q9NWB1 397 aaKnown RBP12.75□□□□□ -0.37
SNIP1-202ENST00000468040 NLKQ9UBE8 527 aa12.75□□□□□ -0.37
SNIP1-202ENST00000468040 F8VVB4 439 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 F8VWA3 439 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 TMEM127O75204 238 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 BPNT1O95861 308 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 KNG1P01042 644 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 SFTPBP07988 381 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 TGFBR1P36897 503 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 SERPINB10P48595 397 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 FGF12P61328 243 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 HOXA4Q00056 320 aaPredicted RBP12.74□□□□□ -0.37
SNIP1-202ENST00000468040 DGUOKQ16854 277 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 SLC22A6Q4U2R8 563 aa12.74□□□□□ -0.37
SNIP1-202ENST00000468040 FAM166AQ6J272 317 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms