RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 SLC7A11Q9UPY5 501 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 HSPE1-MOB4S4R3N1 261 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 ANK2Q01484 3957 aa12.49□□□□□ -0.41
ATG4B-215ENST00000468018 IGHV3OR16-10A0A075B7F0 116 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 RFPL4AA6NLU0 287 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 E9PI62 339 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 RFPL4AL1F8VTS6 287 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 CLDN34H7C241 214 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 DCKP27707 260 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 COMPP49747 757 aaPredicted RBP12.48□□□□□ -0.41
ATG4B-215ENST00000468018 ARF6P62330 175 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 PDCD1Q15116 288 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 CNN3Q15417 329 aaKnown RBP12.48□□□□□ -0.41
ATG4B-215ENST00000468018 GPR157Q5UAW9 335 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 LAIR2Q6ISS4 152 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 BRD3OSQ6XYD6 125 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 DHRSXQ8N5I4 330 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 Q8N7P7 452 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 ZNRF1Q8ND25 227 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 PCGF1Q9BSM1 259 aa12.48□□□□□ -0.41
ATG4B-215ENST00000468018 FAM230AA0A1W2PPH8 454 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 TMEM89A2RUT3 159 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 F8VVB4 439 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 F8VWA3 439 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 H0YAE9 185 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 ALX3O95076 343 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 ZFPL1O95159 310 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 SERPINA3P01011 423 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 KNG1P01042 644 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 MT-ND2P03891 347 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 RPSAP08865 295 aaKnown RBP12.47□□□□□ -0.41
ATG4B-215ENST00000468018 ATF1P18846 271 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 PRTN3P24158 256 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 GABRA2P47869 451 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 GABPB1Q06547 395 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-215ENST00000468018 C1orf122Q6ZSJ8 110 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 ZNF561Q8N587 486 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 SETD9Q8NE22 299 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 NPRL2Q8WTW4 380 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 TNFRSF14Q92956 283 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 SPSB1Q96BD6 273 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 FGGYQ96C11 551 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 BORCS8Q96FH0 119 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 DCLRE1BQ9H816 532 aa12.47□□□□□ -0.41
ATG4B-215ENST00000468018 UNKLQ9H9P5 680 aaKnown RBP12.47□□□□□ -0.41
ATG4B-215ENST00000468018 ZMAT3Q9HA38 289 aaKnown RBP12.47□□□□□ -0.41
ATG4B-215ENST00000468018 SEBOXQ9HB31 216 aaPredicted RBP12.47□□□□□ -0.41
ATG4B-215ENST00000468018 DIMT1Q9UNQ2 313 aaKnown RBP12.47□□□□□ -0.41
ATG4B-215ENST00000468018 TRBV23-1A0A0A0MS06 115 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 DNAJC9-AS1A6NH13 148 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 TMEM212A6NML5 194 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 NXPH2O95156 264 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 GNAO1P09471 354 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 AZGP1P25311 298 aaKnown RBP12.46□□□□□ -0.41
ATG4B-215ENST00000468018 PRDX2P32119 198 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 CAPGP40121 348 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 RBP2P50120 134 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 ETV1P50549 477 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 CCDC58Q4VC31 144 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 RUSC1-AS1Q66K80 236 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 XAF1Q6GPH4 301 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 VMO1Q7Z5L0 202 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 PARP16Q8N5Y8 322 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 ZNF676Q8N7Q3 588 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 ZNF485Q8NCK3 441 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 CYGBQ8WWM9 190 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 CEP19Q96LK0 163 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 PDCD1LG2Q9BQ51 273 aa12.46□□□□□ -0.41
ATG4B-215ENST00000468018 CAB39Q9Y376 341 aaPredicted RBP12.46□□□□□ -0.41
ATG4B-215ENST00000468018 IGHV1-69DA0A0B4J2H0 117 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 MDFIC2A0A1B0GVS7 189 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 IRGMA1A4Y4 181 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 M0R1W7 72 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 IGHV1-69P01742 117 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 RNASE1P07998 156 aaKnown RBP12.45□□□□□ -0.42
ATG4B-215ENST00000468018 CCDC159P0C7I6 412 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 PIPP12273 146 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-215ENST00000468018 PRKACBP22694 351 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 CEBPDP49716 269 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-215ENST00000468018 GTF2A1P52655 376 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-215ENST00000468018 GBX2P52951 348 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-215ENST00000468018 CDK5R1Q15078 307 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 SLC9A3R2Q15599 337 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 DEFB112Q30KQ8 113 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 ASPHD2Q6ICH7 369 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 ZNF529Q6P280 563 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 RBMS3Q6XE24 437 aaKnown RBP12.45□□□□□ -0.42
ATG4B-215ENST00000468018 LHFPL2Q6ZUX7 228 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 TMEM185AQ8NFB2 350 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 RGP1Q92546 391 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-215ENST00000468018 OPALINQ96PE5 141 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 FAM234AQ9H0X4 552 aa12.45□□□□□ -0.42
ATG4B-215ENST00000468018 ELL3Q9HB65 397 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-215ENST00000468018 NKX1-2Q9UD57 310 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-215ENST00000468018 RNASEK-C17orf49H0YIS7 233 aa12.44□□□□□ -0.42
ATG4B-215ENST00000468018 OGG1O15527 345 aa12.44□□□□□ -0.42
ATG4B-215ENST00000468018 ZNF737O75373 536 aa12.44□□□□□ -0.42
ATG4B-215ENST00000468018 ZNF20P17024 532 aa12.44□□□□□ -0.42
ATG4B-215ENST00000468018 NDUFB7P17568 137 aa12.44□□□□□ -0.42
ATG4B-215ENST00000468018 ATP1B3P54709 279 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms