RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 MUC20Q8N307 709 aaPredicted RBP8.7□□□□□ -1.02
PMF1-204ENST00000466489 BPIFB2Q8N4F0 458 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 BVESQ8NE79 360 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 RNF141Q8WVD5 230 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 RNF133Q8WVZ7 376 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 AQP3Q92482 292 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 S100PBPQ96BU1 408 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 SAT2Q96F10 170 aaPredicted RBP8.7□□□□□ -1.02
PMF1-204ENST00000466489 ABHD6Q9BV23 337 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 FXYD6Q9H0Q3 95 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 POFUT1Q9H488 388 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 GPR35Q9HC97 309 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 RAB18Q9NP72 206 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 CRIM1Q9NZV1 1036 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 DNAJB11Q9UBS4 358 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 ZNF391Q9UJN7 358 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 EDARQ9UNE0 448 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 TMA7Q9Y2S6 64 aaKnown RBP8.7□□□□□ -1.02
PMF1-204ENST00000466489 POMT1Q9Y6A1 747 aa8.7□□□□□ -1.02
PMF1-204ENST00000466489 HEATR1Q9H583 2144 aaKnown RBP8.69□□□□□ -1.02
PMF1-204ENST00000466489 TVP23AA6NH52 213 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 OR5H1A6NKK0 313 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 DHRS7CA6NNS2 312 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 CEACAM18A8MTB9 384 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 ABCD4O14678 606 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 SYT7O43581 403 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 MTRF1O75570 445 aaKnown RBP8.69□□□□□ -1.02
PMF1-204ENST00000466489 ITGA5P08648 1049 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 NMBP08949 121 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 PGA4P0DJD7 388 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 PGA3P0DJD8 388 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 ZNF20P17024 532 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 CTRB1P17538 263 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 PSMB6P28072 239 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 NTF4P34130 210 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 TAF13Q15543 124 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 KCNMB1Q16558 191 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 VAX1Q5SQQ9 334 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 CTRB2Q6GPI1 263 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 ALKBH2Q6NS38 261 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 MOB3CQ70IA8 216 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 UTS2BQ765I0 119 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 WFDC8Q8IUA0 241 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 PRSS35Q8N3Z0 413 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 JAGN1Q8N5M9 183 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 ACBD4Q8NC06 268 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 SLC26A10Q8NG04 563 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 OR1K1Q8NGR3 316 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 TERB2Q8NHR7 220 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 STOML3Q8TAV4 291 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 LINC01560Q8TB33 94 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 TMEM54Q969K7 222 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 MARC2Q969Z3 335 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 RNF166Q96A37 237 aaPredicted RBP8.69□□□□□ -1.02
PMF1-204ENST00000466489 SLC25A28Q96A46 364 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 WFIKKN1Q96NZ8 548 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 GFI1Q99684 422 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 ARPC5LQ9BPX5 153 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 NARFLQ9H6Q4 476 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 ESRP2Q9H6T0 727 aaKnown RBP8.69□□□□□ -1.02
PMF1-204ENST00000466489 C12orf4Q9NQ89 552 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 RASL12Q9NYN1 266 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 GTF2A1LQ9UNN4 478 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 PRELID1Q9Y255 219 aa8.69□□□□□ -1.02
PMF1-204ENST00000466489 TRAV8-7A0A075B6U6 113 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 A0A1B0GTI1 187 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 TMEM272A0A1B0GTI8 110 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 SERPINE3A8MV23 424 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 LDLRAD4O15165 306 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 DHHO43323 396 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 HLA-AP01891 365 aaKnown RBP8.68□□□□□ -1.02
PMF1-204ENST00000466489 RLN2P04090 185 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 CD3DP04234 171 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 QDPRP09417 244 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 CXCL2P19875 107 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 CRYGSP22914 178 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 COL8A1P27658 744 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 CCKARP32238 428 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 ARF1P84077 181 aaKnown RBP8.68□□□□□ -1.02
PMF1-204ENST00000466489 ECH1Q13011 328 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 SNTB1Q13884 538 aaKnown RBP8.68□□□□□ -1.02
PMF1-204ENST00000466489 GABRA6Q16445 453 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 NRN1LQ496H8 165 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 CDNFQ49AH0 187 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 BEX5Q5H9J7 111 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 LRFN4Q6PJG9 635 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 ZNF813Q6ZN06 617 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 DOK3Q7L591 496 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 DPPA2Q7Z7J5 298 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 SYT9Q86SS6 491 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 COMMD1Q8N668 190 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 TMEM185AQ8NFB2 350 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 C14orf79Q96F83 325 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 KCNK17Q96T54 332 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 FOXB1Q99853 325 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.68□□□□□ -1.02
PMF1-204ENST00000466489 TAS2R3Q9NYW6 316 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 FLVCR2Q9UPI3 526 aa8.68□□□□□ -1.02
PMF1-204ENST00000466489 NOP16Q9Y3C1 178 aaKnown RBP8.68□□□□□ -1.02
PMF1-204ENST00000466489 LRP12Q9Y561 859 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms