RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 CD8AP01732 235 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 SERPINA5P05154 406 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 DUX4L2P0CJ85 424 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 DUX4L3P0CJ86 424 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 DUX4L4P0CJ87 422 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 DUX4L5P0CJ88 424 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 DUX4L6P0CJ89 424 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 DUX4L7P0CJ90 424 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 ZNF14P17017 642 aaPredicted RBP16.06■□□□□ 0.16
CAPN3-209ENST00000466222 DMRTC1Q5HYR2 192 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 DRAM2Q6UX65 266 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 SLC51BQ86UW2 128 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 BPIFB2Q8N4F0 458 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 OR51A2Q8NGJ7 313 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 PRR7Q8TB68 274 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 FAM46BQ96A09 425 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 SGK3Q96BR1 496 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 DUX4Q9UBX2 424 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 FBLN5Q9UBX5 448 aa16.06■□□□□ 0.16
CAPN3-209ENST00000466222 RTTNQ86VV8 2226 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 SHANK1Q9Y566 2161 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 OR5H1A6NKK0 313 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 SYT7O43581 403 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 NMBP08949 121 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 IL32P24001 234 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 CCKARP32238 428 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 TLE1Q04724 770 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 PLP2Q04941 152 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 DCAF12L2Q5VW00 463 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 TMEM65Q6PI78 240 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 ZNF101Q8IZC7 436 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 C1orf162Q8NEQ5 155 aaPredicted RBP16.05■□□□□ 0.16
CAPN3-209ENST00000466222 PCNPQ8WW12 178 aaKnown RBP16.05■□□□□ 0.16
CAPN3-209ENST00000466222 NANOS1Q8WY41 292 aaKnown RBP16.05■□□□□ 0.16
CAPN3-209ENST00000466222 WDR89Q96FK6 387 aaPredicted RBP16.05■□□□□ 0.16
CAPN3-209ENST00000466222 NKX3-1Q99801 234 aaPredicted RBP16.05■□□□□ 0.16
CAPN3-209ENST00000466222 REG4Q9BYZ8 158 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 SDHAF2Q9NX18 166 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 JKAMPQ9P055 326 aa16.05■□□□□ 0.16
CAPN3-209ENST00000466222 A0A0D9SG52 128 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 ERCC1P07992 297 aaPredicted RBP16.04■□□□□ 0.16
CAPN3-209ENST00000466222 TBPP20226 339 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 GNLYP22749 145 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 HOXC12P31275 282 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 WNT5AP41221 380 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 ADORA2A-AS1P86434 159 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 TMEM211Q6ICI0 200 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 MRGPRGQ86SM5 289 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 ZDHHC22Q8N966 263 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 SLC30A7Q8NEW0 376 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 FGGYQ96C11 551 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 BOD1Q96IK1 185 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 TINAGL1Q9GZM7 467 aaPredicted RBP16.04■□□□□ 0.16
CAPN3-209ENST00000466222 CHST6Q9GZX3 395 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 MFFQ9GZY8 342 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 PIGMQ9H3S5 423 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 SPEF1Q9Y4P9 236 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 KRBOX1C9JBD0 128 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 UBBP0CG47 229 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 RPS27AP62979 156 aaKnown RBP16.04■□□□□ 0.16
CAPN3-209ENST00000466222 UBA52P62987 128 aaKnown RBP16.04■□□□□ 0.16
CAPN3-209ENST00000466222 ZNF260Q3ZCT1 412 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 ATPAF1Q5TC12 328 aaPredicted RBP16.04■□□□□ 0.16
CAPN3-209ENST00000466222 LIN54Q6MZP7 749 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 OR5M8Q8NGP6 311 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 ADAT3Q96EY9 351 aaPredicted RBP16.04■□□□□ 0.16
CAPN3-209ENST00000466222 SLC25A15Q9Y619 301 aa16.04■□□□□ 0.16
CAPN3-209ENST00000466222 HLA-GP17693 338 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 APLNRP35414 380 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 SORDQ00796 357 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 SNTB1Q13884 538 aaKnown RBP16.03■□□□□ 0.16
CAPN3-209ENST00000466222 RNASE10Q5GAN6 216 aaKnown RBP16.03■□□□□ 0.16
CAPN3-209ENST00000466222 FAHD2BQ6P2I3 314 aaPredicted RBP16.03■□□□□ 0.16
CAPN3-209ENST00000466222 OVCH2Q7RTZ1 564 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 STEAP2Q8NFT2 490 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 OR1M1Q8NGA1 313 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 OR4D6Q8NGJ1 314 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 OR1J2Q8NGS2 313 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 FAHD2AQ96GK7 314 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 CCDC120Q96HB5 630 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 C1QTNF5Q9BXJ0 243 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 PPA2Q9H2U2 334 aa16.03■□□□□ 0.16
CAPN3-209ENST00000466222 INTS1Q8N201 2190 aaKnown RBP16.02■□□□□ 0.16
CAPN3-209ENST00000466222 M0QYG6 137 aa16.02■□□□□ 0.16
CAPN3-209ENST00000466222 IGLV3-1P01715 115 aa16.02■□□□□ 0.16
CAPN3-209ENST00000466222 COX5BP10606 129 aa16.02■□□□□ 0.16
CAPN3-209ENST00000466222 MGMTP16455 207 aa16.02■□□□□ 0.16
CAPN3-209ENST00000466222 UBE2MP61081 183 aaKnown RBP16.02■□□□□ 0.16
CAPN3-209ENST00000466222 ZNF92Q03936 586 aa16.02■□□□□ 0.16
CAPN3-209ENST00000466222 ZNF345Q14585 488 aa16.02■□□□□ 0.16
CAPN3-209ENST00000466222 LY6G6FQ5SQ64 297 aa16.02■□□□□ 0.16
CAPN3-209ENST00000466222 COLCA1Q6ZS62 124 aa16.02■□□□□ 0.16
CAPN3-209ENST00000466222 HSD17B13Q7Z5P4 300 aaPredicted RBP16.02■□□□□ 0.16
CAPN3-209ENST00000466222 STARD10Q9Y365 291 aa16.02■□□□□ 0.16
CAPN3-209ENST00000466222 COL12A1Q99715 3063 aa16.02■□□□□ 0.15
CAPN3-209ENST00000466222 RAB27BO00194 218 aa16.02■□□□□ 0.15
CAPN3-209ENST00000466222 IGKV3-15P01624 115 aa16.02■□□□□ 0.15
CAPN3-209ENST00000466222 APOC1P02654 83 aa16.02■□□□□ 0.15
CAPN3-209ENST00000466222 SLC25A4P12235 298 aa16.02■□□□□ 0.15
CAPN3-209ENST00000466222 CBR1P16152 277 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 217.1 ms