RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PLEKHJ1Q9NW61 149 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 LHX6Q9UPM6 363 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 SSUH2Q9Y2M2 353 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 ESPL1Q14674 2120 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 IGKV1-12A0A0C4DH73 117 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 F5H5P2 479 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 IGKV1D-12P01611 117 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 AMY2BP19961 511 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 CBX5P45973 191 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 ATP1B3P54709 279 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 TGFBR3Q03167 851 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 TAF9Q16594 264 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 ZDHHC22Q8N966 263 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 OR8H1Q8NGG4 311 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 WBP1Q96G27 269 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 PAPOLGQ9BWT3 736 aaKnown RBP15.73■□□□□ 0.11
COL9A3-205ENST00000466192 FN3KRPQ9HA64 309 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 LUZP4Q9P127 313 aa15.73■□□□□ 0.11
COL9A3-205ENST00000466192 PRR14LQ5THK1 2151 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 SERPINE3A8MV23 424 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 TPOP07202 933 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 CELA3BP08861 270 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 SNU13P55769 128 aaKnown RBP15.72■□□□□ 0.11
COL9A3-205ENST00000466192 PDZK1IP1Q13113 114 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 TSC22D1Q15714 1073 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 GABRA6Q16445 453 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 PLEKHN1Q494U1 663 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-205ENST00000466192 SLC25A42Q86VD7 318 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 MARCH1Q8TCQ1 289 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 OR51B6Q9H340 312 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 ZNF581Q9P0T4 197 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 LEUTXA8MZ59 168 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 ZNF14P17017 642 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-205ENST00000466192 PER3P56645 1201 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 PRDX4Q13162 271 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 IKZF1Q13422 519 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 PPP1R1AQ13522 171 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 NSUN5P2Q63ZY6 315 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 CALHM1Q8IU99 346 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 ADAD2Q8NCV1 583 aaKnown RBP15.72■□□□□ 0.11
COL9A3-205ENST00000466192 OR5H2Q8NGV7 314 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 OR6K3Q8NGY3 331 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 RADILQ96JH8 1075 aa15.72■□□□□ 0.11
COL9A3-205ENST00000466192 FGF23Q9GZV9 251 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-205ENST00000466192 ZNF701Q9NV72 531 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-205ENST00000466192 ZNF629Q9UEG4 869 aaPredicted RBP15.72■□□□□ 0.11
COL9A3-205ENST00000466192 CNOT4O95628 575 aaKnown RBP15.71■□□□□ 0.11
COL9A3-205ENST00000466192 AKR1C4P17516 323 aa15.71■□□□□ 0.11
COL9A3-205ENST00000466192 ACTBL2Q562R1 376 aa15.71■□□□□ 0.11
COL9A3-205ENST00000466192 VAX1Q5SQQ9 334 aa15.71■□□□□ 0.11
COL9A3-205ENST00000466192 OR2A2Q6IF42 318 aa15.71■□□□□ 0.11
COL9A3-205ENST00000466192 HOGA1Q86XE5 327 aa15.71■□□□□ 0.11
COL9A3-205ENST00000466192 CSNK2A3Q8NEV1 391 aa15.71■□□□□ 0.11
COL9A3-205ENST00000466192 TERB2Q8NHR7 220 aa15.71■□□□□ 0.11
COL9A3-205ENST00000466192 HEXA-AS1Q9H8Q6 139 aa15.71■□□□□ 0.11
COL9A3-205ENST00000466192 NOP16Q9Y3C1 178 aaKnown RBP15.71■□□□□ 0.11
COL9A3-205ENST00000466192 SDCBPO00560 298 aaPredicted RBP15.7■□□□□ 0.1
COL9A3-205ENST00000466192 CD34P28906 385 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 UBE2NP61088 152 aaKnown RBP15.7■□□□□ 0.1
COL9A3-205ENST00000466192 ARL6IP1Q15041 203 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 SEM1Q6ZVN7 128 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 SLC51BQ86UW2 128 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 PXT1Q8NFP0 134 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 HPSE2Q8WWQ2 592 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 HDHD3Q9BSH5 251 aaPredicted RBP15.7■□□□□ 0.1
COL9A3-205ENST00000466192 NARFLQ9H6Q4 476 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 WASF3Q9UPY6 502 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 PLSCR5A0PG75 271 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 TNFSF13O75888 250 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 CST4P01036 141 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 SFTPBP07988 381 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 ZBTB25P24278 435 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 EIF2S3P41091 472 aaKnown RBP15.7■□□□□ 0.1
COL9A3-205ENST00000466192 NPY4RP50391 375 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 MPPED2Q15777 294 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 PIGYQ3MUY2 71 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 RPUSD3Q6P087 351 aaKnown RBP15.7■□□□□ 0.1
COL9A3-205ENST00000466192 TEX261Q6UWH6 196 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 LYG2Q86SG7 212 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 SPACA3Q8IXA5 215 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 ARRDC1Q8N5I2 433 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 OR51F2Q8NH61 342 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 FAAP24Q9BTP7 215 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 U3KQ87 197 aa15.7■□□□□ 0.1
COL9A3-205ENST00000466192 PQLC2LA1A4F0 135 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 FIGNL2A6NMB9 653 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 CD300LBA8K4G0 201 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 GEMIN2O14893 280 aaKnown RBP15.69■□□□□ 0.1
COL9A3-205ENST00000466192 GFRA3O60609 400 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 COX5AP20674 150 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 VAMP1P23763 118 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 IDH3GP51553 393 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-205ENST00000466192 IL13RA1P78552 427 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 GRK1Q15835 563 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 TBC1D28Q2M2D7 210 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 LY6G6FQ5SQ64 297 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 LIN54Q6MZP7 749 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 BHLHE23Q8NDY6 225 aa15.69■□□□□ 0.1
COL9A3-205ENST00000466192 DPCDQ9BVM2 203 aaPredicted RBP15.69■□□□□ 0.1
COL9A3-205ENST00000466192 OPA3Q9H6K4 179 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms