RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 BEND2Q8NDZ0 799 aa15.38■□□□□ 0.05
SF3A1-205ENST00000463818 OR4M1Q8NGD0 313 aa15.38■□□□□ 0.05
SF3A1-205ENST00000463818 CENPNQ96H22 339 aaPredicted RBP15.38■□□□□ 0.05
SF3A1-205ENST00000463818 OR14J1Q9UGF5 321 aa15.38■□□□□ 0.05
SF3A1-205ENST00000463818 H3BSH0 61 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 M0QZ24 198 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 TIMM23O14925 209 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 TSPAN9O75954 239 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 CCL1P22362 96 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 MPZP25189 248 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 ATP6V1E1P36543 226 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 OCLNQ16625 522 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 CALHM1Q8IU99 346 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 C10orf67Q8IYJ2 551 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 C11orf42Q8N5U0 333 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 OR10H4Q8NGA5 316 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 TRMT10AQ8TBZ6 339 aaKnown RBP15.37■□□□□ 0.05
SF3A1-205ENST00000463818 AJUBAQ96IF1 538 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 OSBPL10Q9BXB5 764 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 RIBC2Q9H4K1 309 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 HEXA-AS1Q9H8Q6 139 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 HES4Q9HCC6 221 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 TCF7L1Q9HCS4 588 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.37■□□□□ 0.05
SF3A1-205ENST00000463818 SLC7A11Q9UPY5 501 aa15.37■□□□□ 0.05
SF3A1-205ENST00000463818 A0A1W2PPH5 198 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 FAM230AA0A1W2PPH8 454 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 ANKRD61A6NGH8 418 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 SYT7O43581 403 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 SULT1C4O75897 302 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 ERVK11-1P61568 191 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 DEFA6Q01524 100 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 GABPB1Q06547 395 aaPredicted RBP15.36■□□□□ 0.05
SF3A1-205ENST00000463818 UBE2V2Q15819 145 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 SLC35E4Q6ICL7 350 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 OR8J1Q8NGP2 316 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 PYDC1Q8WXC3 89 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 RORBQ92753 470 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 EME1Q96AY2 570 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 SSX3Q99909 188 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 ADI1Q9BV57 179 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 PKIBQ9C010 78 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 MEGF9Q9H1U4 602 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 PPA2Q9H2U2 334 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 OAZ3Q9UMX2 235 aa15.36■□□□□ 0.05
SF3A1-205ENST00000463818 SAC3D1A6NKF1 404 aa15.35■□□□□ 0.05
SF3A1-205ENST00000463818 H3BUX3 64 aa15.35■□□□□ 0.05
SF3A1-205ENST00000463818 TK1P04183 234 aa15.35■□□□□ 0.05
SF3A1-205ENST00000463818 ERVFRD-1P60508 538 aa15.35■□□□□ 0.05
SF3A1-205ENST00000463818 IL24Q13007 206 aa15.35■□□□□ 0.05
SF3A1-205ENST00000463818 RBM4BQ9BQ04 359 aaKnown RBP15.35■□□□□ 0.05
SF3A1-205ENST00000463818 GABARAPL3Q9BY60 117 aa15.35■□□□□ 0.05
SF3A1-205ENST00000463818 FAM234AQ9H0X4 552 aa15.35■□□□□ 0.05
SF3A1-205ENST00000463818 hCG_1809904A0A1W2PP81 198 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 A0A1W2PPE2 198 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 A0A1W2PR64 198 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 A0A1W2PRV1 198 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 CCL3L1P16619 93 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 PAX6P26367 422 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 FUT6P51993 359 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 TMED1Q13445 227 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 ZNF273Q14593 569 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 LY6EQ16553 131 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 PRSS35Q8N3Z0 413 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 UBE2FQ969M7 185 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 PLEKHA1Q9HB21 404 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 USE1Q9NZ43 259 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 MTCH1Q9NZJ7 389 aa15.34■□□□□ 0.05
SF3A1-205ENST00000463818 CMYA5Q8N3K9 4069 aa15.33■□□□□ 0.05
SF3A1-205ENST00000463818 IGKV1-27A0A075B6S5 117 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 F8VVB4 439 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 F8VWA3 439 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 K7N7A8 449 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 INMTO95050 263 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 PIPP12273 146 aaPredicted RBP15.33■□□□□ 0.04
SF3A1-205ENST00000463818 COX7A1P24310 79 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 COL10A1Q03692 680 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 ZNF85Q03923 595 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 RDH10Q8IZV5 341 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 CCDC54Q8NEL0 328 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 PPP1R35Q8TAP8 253 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 RFKQ969G6 155 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 MMP27Q9H306 513 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 FBLN5Q9UBX5 448 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 WNK1Q9H4A3 2382 aa15.33■□□□□ 0.04
SF3A1-205ENST00000463818 GATBO75879 557 aaKnown RBP15.32■□□□□ 0.04
SF3A1-205ENST00000463818 SERPINA3P01011 423 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 CHRM2P08172 466 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 BMXP51813 675 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 LGALS4P56470 323 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 CDC42P60953 191 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 LRRC75BQ2VPJ9 315 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 TP53I3Q53FA7 332 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 EGFL6Q8IUX8 553 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 ASCC1Q8N9N2 400 aaKnown RBP15.32■□□□□ 0.04
SF3A1-205ENST00000463818 SLAMF9Q96A28 289 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 CEP19Q96LK0 163 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 GNG8Q9UK08 70 aa15.32■□□□□ 0.04
SF3A1-205ENST00000463818 C17orf98A8MV24 154 aa15.31■□□□□ 0.04
SF3A1-205ENST00000463818 GABRA5P31644 462 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms