RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ELL3Q9HB65 397 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-208ENST00000456385 FOXD3Q9UJU5 478 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-208ENST00000456385 NXT1Q9UKK6 140 aaKnown RBP9.03□□□□□ -0.96
CLIP4-208ENST00000456385 B3GALT1Q9Y5Z6 326 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 PTPRSQ13332 1948 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 GON4LQ3T8J9 2241 aa9.03□□□□□ -0.96
CLIP4-208ENST00000456385 SEC16AO15027 2179 aa9.02□□□□□ -0.96
CLIP4-208ENST00000456385 ELOA3CA0A087WX78 387 aaPredicted RBP9.02□□□□□ -0.97
CLIP4-208ENST00000456385 FAM24AA6NFZ4 105 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 TCAPO15273 167 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 IFNA10P01566 189 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 PGA4P0DJD7 388 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 PGA5P0DJD9 388 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 TMEM225BP0DP42 221 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 OPRM1P35372 400 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 EFNA3P52797 238 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 FXYD4P59646 89 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 EWSR1Q01844 656 aaKnown RBP eCLIP9.02□□□□□ -0.97
CLIP4-208ENST00000456385 HHEXQ03014 270 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 PLCXD2Q0VAA5 305 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 CHAF1BQ13112 559 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 ICAM4Q14773 271 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 OR8G1Q15617 311 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 RSPO4Q2I0M5 234 aaPredicted RBP9.02□□□□□ -0.97
CLIP4-208ENST00000456385 AKR1C8PQ5T2L2 129 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 FAM57BQ71RH2 274 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 C5orf24Q7Z6I8 188 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 DTX1Q86Y01 620 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 C17orf78Q8N4C9 275 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 OR5L1Q8NGL2 311 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 STT3BQ8TCJ2 826 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 ZNF721Q8TF20 911 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.02□□□□□ -0.97
CLIP4-208ENST00000456385 RTN4IP1Q8WWV3 396 aaPredicted RBP9.02□□□□□ -0.97
CLIP4-208ENST00000456385 C5orf34Q96MH7 638 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 NIPSNAP3BQ9BS92 247 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 AK3Q9UIJ7 227 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 WASF3Q9UPY6 502 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 POLR1DQ9Y2S0 133 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 TRIOO75962 3097 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 SHISA8B8ZZ34 492 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 DDAH2O95865 285 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 IGKV3-11P04433 115 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 JMJD7P0C870 316 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 PAX1P15863 534 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 ZNF43P17038 809 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 OR1D4P47884 311 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 MNX1P50219 401 aaPredicted RBP9.02□□□□□ -0.97
CLIP4-208ENST00000456385 DAP3P51398 398 aaKnown RBP9.02□□□□□ -0.97
CLIP4-208ENST00000456385 TLE3Q04726 772 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 HIST2H3PS2Q5TEC6 136 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 Q6ZSR6 202 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 CPEB2Q7Z5Q1 589 aaKnown RBP9.02□□□□□ -0.97
CLIP4-208ENST00000456385 DPPA2Q7Z7J5 298 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 SSC4DQ8WTU2 575 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 TMEM171Q8WVE6 324 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 FAM131CQ96AQ9 280 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 FAM210BQ96KR6 192 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 ATG101Q9BSB4 218 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 RNF208Q9H0X6 261 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 UNKLQ9H9P5 680 aaKnown RBP9.02□□□□□ -0.97
CLIP4-208ENST00000456385 WSB1Q9Y6I7 421 aa9.02□□□□□ -0.97
CLIP4-208ENST00000456385 RP1P56715 2156 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 A0A087WZY1 265 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 A0A1W2PQF6 199 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 SMCO3A2RU48 225 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 SERPINE3A8MV23 424 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 A8MWP6 167 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 H3BML4 177 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 GEMIN2O14893 280 aaKnown RBP9.01□□□□□ -0.97
CLIP4-208ENST00000456385 ST8SIA3O43173 380 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 TSPAN2O60636 221 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 SCAF4O95104 1147 aaKnown RBP9.01□□□□□ -0.97
CLIP4-208ENST00000456385 ONECUT2O95948 504 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 OPN1LWP04000 364 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 FUT3P21217 361 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 APLNRP35414 380 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 FZD2Q14332 565 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 C16orf47Q6ZP98 133 aaPredicted RBP9.01□□□□□ -0.97
CLIP4-208ENST00000456385 H1FNTQ75WM6 255 aaPredicted RBP9.01□□□□□ -0.97
CLIP4-208ENST00000456385 PRSS58Q8IYP2 241 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 ZNF664Q8N3J9 261 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 SUMF1Q8NBK3 374 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 OR11L1Q8NGX0 322 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 M1APQ8TC57 530 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 SMDT1Q9H4I9 107 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 NAA60Q9H7X0 242 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 LANCL2Q9NS86 450 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 PLEKHJ1Q9NW61 149 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 ANXA10Q9UJ72 324 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 HSF4Q9ULV5 492 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 MYO7BQ6PIF6 2116 aa9.01□□□□□ -0.97
CLIP4-208ENST00000456385 CCDC187A0A096LP49 1063 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 FAM221BA6H8Z2 402 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 ZNF850A8MQ14 1090 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 C9J4A7 227 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 SEMA4FO95754 770 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 GZMBP10144 247 aa9□□□□□ -0.97
CLIP4-208ENST00000456385 RUNX1Q01196 453 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 165.3 ms