RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 FAHP16930 419 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 TNFRSF1AP19438 455 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 ACKR3P25106 362 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 RPS19P39019 145 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 PPP3R1P63098 170 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 LCN2P80188 198 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 MZT1Q08AG7 82 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 HSD17B12Q53GQ0 312 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 C1orf229Q6ZS94 237 aaPredicted RBP14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 PARP16Q8N5Y8 322 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 OR13G1Q8NGZ3 307 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 SLC25A46Q96AG3 418 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 DERL3Q96Q80 235 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 SLC30A2Q9BRI3 323 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 CCDC32Q9BV29 185 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 PAPOLGQ9BWT3 736 aaKnown RBP14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 ETAA1Q9NY74 926 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 IL19Q9UHD0 177 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 ADAM30Q9UKF2 790 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 PPP1R3CQ9UQK1 317 aa14.32□□□□□ -0.12
PRPF40A-204ENST00000450303 LOC105371242A0A075B767 164 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 NRASP01111 189 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 IGHV2-70P01814 119 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 MYL9P24844 172 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 CNN3Q15417 329 aaKnown RBP14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 MZT2AQ6P582 158 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 TMEM91Q6ZNR0 172 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 UTS2BQ765I0 119 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 KRT74Q7RTS7 529 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 SPERTQ8NA61 448 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 ADAT3Q96EY9 351 aaPredicted RBP14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 WDFY2Q96P53 400 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 C19orf24Q9BVV8 132 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 ZCCHC4Q9H5U6 513 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 TCF7L1Q9HCS4 588 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 NOX4Q9NPH5 578 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 PCDHB10Q9UN67 800 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 FOXJ3Q9UPW0 622 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 SLC7A11Q9UPY5 501 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 RHBDD3Q9Y3P4 386 aa14.31□□□□□ -0.12
PRPF40A-204ENST00000450303 TRBV5-7A0A0A0MS05 114 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 ANKRD61A6NGH8 418 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 F5H5P2 479 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 MAGEB3O15480 346 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 MLNRO43193 412 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 TCF21O43680 179 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 GMDSO60547 372 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 ZNF205O95201 554 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 UCHL1P09936 223 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 RAB3AP20336 220 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 PRDX4Q13162 271 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 OR8G1Q15617 311 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 DDI2Q5TDH0 399 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 DCAF12L2Q5VW00 463 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 MOB3CQ70IA8 216 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 ZDHHC23Q8IYP9 409 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 OR8S1Q8NH09 359 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 MEGF10Q96KG7 1140 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 TMPRSS13Q9BYE2 586 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 CHST5Q9GZS9 411 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 ABCB10Q9NRK6 738 aa14.3□□□□□ -0.12
PRPF40A-204ENST00000450303 A0A1W2PPK0 400 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 MEGF11A6BM72 1044 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 A6NIN4 97 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 ZNF850A8MQ14 1090 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 ALX3O95076 343 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 APOA1P02647 267 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 ADRA2CP18825 462 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 ATF1P18846 271 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 FSTP19883 344 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 PRKACBP22694 351 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 CA6P23280 308 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 ZFP36P26651 326 aaKnown RBP14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 SDC2P34741 201 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 MXD1Q05195 221 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 OXA1LQ15070 435 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 ZMYND11Q15326 602 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 PLCXD3Q63HM9 321 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 TMEM42Q69YG0 159 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 CCDC190Q86UF4 302 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 MICU1Q9BPX6 476 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 GCM1Q9NP62 436 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 GPR173Q9NS66 373 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 STAB1Q9NY15 2570 aa14.29□□□□□ -0.12
PRPF40A-204ENST00000450303 A0A0G2JMP0 313 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 A0A0X1KG70 313 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 TMEM178BH3BS89 294 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 PDCD5O14737 125 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 SULT1B1O43704 296 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 CYB5R3P00387 301 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 SRMP19623 302 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 MTNR1BP49286 362 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 SEC61A1P61619 476 aaKnown RBP14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 BTG1P62324 171 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 INSL4Q14641 139 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 MOGAT3Q86VF5 341 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 LRRC28Q86X40 367 aaPredicted RBP14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 OR1M1Q8NGA1 313 aa14.28□□□□□ -0.12
PRPF40A-204ENST00000450303 OR4M2Q8NGB6 313 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms