RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 TP53I13Q8NBR0 393 aaPredicted RBP12.44□□□□□ -0.42
ITGB4-202ENST00000449880 OR5C1Q8NGR4 320 aa12.44□□□□□ -0.42
ITGB4-202ENST00000449880 KCNE4Q8WWG9 221 aa12.44□□□□□ -0.42
ITGB4-202ENST00000449880 CCDC74BQ96LY2 380 aa12.44□□□□□ -0.42
ITGB4-202ENST00000449880 DEFB127Q9H1M4 99 aa12.44□□□□□ -0.42
ITGB4-202ENST00000449880 TMEM265A0A087WTH1 108 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 LNP1A1A4G5 178 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 CEACAM5P06731 702 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 BHLHE23Q8NDY6 225 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 NRIP2Q9BQI9 281 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 PARP14Q460N5 1801 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 LOC105371267A0A1B0GV96 52 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 TBXA2RP21731 343 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 FUT7Q11130 342 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 RTL8BQ17RB0 113 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 KHDC1LQ5JSQ8 128 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 MRGPRX1Q96LB2 322 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 TRIB1Q96RU8 372 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 LOXL2Q9Y4K0 774 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 FUT3P21217 361 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 CLN3Q13286 438 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 ATP5SQ99766 215 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 MMP25Q9NPA2 562 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 ST3GAL6Q9Y274 331 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 IGHV3-9P01782 118 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 TMEM196Q5HYL7 178 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 COL5A1-AS1Q5SY13 56 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 Q6ZN92 141 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 ADGRG7Q96K78 797 aa12.43□□□□□ -0.42
ITGB4-202ENST00000449880 SIRT3Q9NTG7 399 aaPredicted RBP12.43□□□□□ -0.42
ITGB4-202ENST00000449880 PCDHGA9Q9Y5G4 932 aaKnown RBP12.43□□□□□ -0.42
ITGB4-202ENST00000449880 CXCL2P19875 107 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 SLC2A9Q9NRM0 540 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 NAT8BQ9UHF3 227 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 C3orf85A0A1B0GTC6 90 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 CDC14BO60729 498 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 KCNAB1Q14722 419 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 C16orf52Q8NHV5 167 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 WSB2Q9NYS7 404 aaPredicted RBP12.42□□□□□ -0.42
ITGB4-202ENST00000449880 KIAA1456Q9P272 454 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 PRRC2BQ5JSZ5 2229 aaKnown RBP12.42□□□□□ -0.42
ITGB4-202ENST00000449880 A0A1W2PPC4 97 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 CAPZBP47756 277 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 GPR12P47775 334 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 ZNF468Q5VIY5 522 aaPredicted RBP12.42□□□□□ -0.42
ITGB4-202ENST00000449880 MYPOPQ86VE0 399 aaPredicted RBP12.42□□□□□ -0.42
ITGB4-202ENST00000449880 PTX4Q96A99 478 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 VAX2Q9UIW0 290 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 ICOSLGO75144 302 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 CST7O76096 145 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 IER2Q9BTL4 223 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 GNB4Q9HAV0 340 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 CCL27Q9Y4X3 112 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 ARID2Q68CP9 1835 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 GAPDHP04406 335 aaKnown RBP12.42□□□□□ -0.42
ITGB4-202ENST00000449880 ARG1P05089 322 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 SLC38A11Q08AI6 406 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 ZDHHC23Q8IYP9 409 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 ZNRF4Q8WWF5 429 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 HDGFL3Q9Y3E1 203 aa12.42□□□□□ -0.42
ITGB4-202ENST00000449880 TMEM11P17152 192 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 GLRA1P23415 457 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 OR2A1Q8NGT9 310 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 EDARADDQ8WWZ3 215 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 HES7Q9BYE0 225 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 FCN1O00602 326 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 HS3ST1O14792 307 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 TOX3O15405 576 aaPredicted RBP12.41□□□□□ -0.42
ITGB4-202ENST00000449880 TIAL1Q01085 375 aaKnown RBP eCLIP12.41□□□□□ -0.42
ITGB4-202ENST00000449880 OR5AS1Q8N127 324 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 CCL4L1Q8NHW4 92 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 OR7C2O60412 319 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 ACAA1P09110 424 aaPredicted RBP12.41□□□□□ -0.42
ITGB4-202ENST00000449880 AGFG1P52594 562 aaKnown RBP12.41□□□□□ -0.42
ITGB4-202ENST00000449880 COL19A1Q14993 1142 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 ELOBQ15370 118 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 FFAR4Q5NUL3 377 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 FA2HQ7L5A8 372 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 ZNF707Q96C28 371 aaPredicted RBP12.41□□□□□ -0.42
ITGB4-202ENST00000449880 EMC6Q9BV81 110 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 RNF24Q9Y225 148 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 PTP4A3O75365 173 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 FAM3BP58499 235 aaPredicted RBP12.41□□□□□ -0.42
ITGB4-202ENST00000449880 TMEM97Q5BJF2 176 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 BTNL3Q6UXE8 466 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 CLEC18BQ6UXF7 455 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 ARHGAP5-AS1Q96IT6 56 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 TPPP3Q9BW30 176 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 FAM117AQ9C073 453 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 PRSS50Q9UI38 385 aa12.41□□□□□ -0.42
ITGB4-202ENST00000449880 H3BQ15 152 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 TNFSF15O95150 251 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 HPP00738 406 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 PAFAH1B2P68402 229 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 MYBPHQ13203 477 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 ZNF362Q5T0B9 420 aaPredicted RBP12.4□□□□□ -0.42
ITGB4-202ENST00000449880 PRDM7Q9NQW5 492 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 DNAJB12Q9NXW2 375 aaKnown RBP12.4□□□□□ -0.42
ITGB4-202ENST00000449880 KCNE3Q9Y6H6 103 aa12.4□□□□□ -0.42
ITGB4-202ENST00000449880 RGPD3A6NKT7 1758 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms