RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 PLAURQ03405 335 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 TMEM229BQ8NBD8 167 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 ASB5Q8WWX0 329 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 PRRX2Q99811 253 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 ONECUT1Q9UBC0 465 aa8.07□□□□□ -1.12
NIPBL-202ENST00000448238 DUOX1Q9NRD9 1551 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 PLIN4Q96Q06 1357 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 LINC00862A6NCI5 91 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 GEMIN2O14893 280 aaKnown RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 GNG7O60262 68 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 SOD2P04179 222 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 FUT7Q11130 342 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 LMAN2Q12907 356 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 JMJD6Q6NYC1 403 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 SIRT6Q8N6T7 355 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 DUSP18Q8NEJ0 188 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 HHIPQ96QV1 700 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 RASL11BQ9BPW5 248 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 SLCO1C1Q9NYB5 712 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 WDR81Q562E7 1941 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 LOC107986453A0A1B0GWG9 222 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 SIRPB1O00241 398 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 DCAF12L1Q5VU92 463 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 ACSM5Q6NUN0 579 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 ZNF562Q6V9R5 426 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 STPG2Q8N412 459 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 KIR2DL4Q99706 377 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 SLC17A5Q9NRA2 495 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 CGGBP1Q9UFW8 167 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 A0A1B0GVG6 124 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 HEPACAM2A8MVW5 462 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 GLI4P10075 376 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 PMELP40967 661 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 BHLHA15Q7RTS1 189 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 PRSS45Q7RTY3 260 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 CA13Q8N1Q1 262 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 MARCH1Q8TCQ1 289 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 C1QTNF6Q9BXI9 259 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 MAP1LC3AQ9H492 121 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 IFITM5A6NNB3 132 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 NHLRC1Q6VVB1 395 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 SLC16A13Q7RTY0 426 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 RDH5Q92781 318 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 NEIL2Q969S2 332 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 GALNT14Q96FL9 552 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 HS3ST2Q9Y278 367 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 A0A0A6YYC8 382 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 I3L1I5 382 aaPredicted RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 CTNSO60931 367 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 TMEM33P57088 247 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 ALKBH6Q3KRA9 238 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 STPG3Q8N7X2 389 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 PIMREGQ9BSJ6 248 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 TAS2R4Q9NYW5 299 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 KCNK7Q9Y2U2 307 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 A0A1B0GWB2 263 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 C5orf49A4QMS7 147 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 PPM1DO15297 605 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 FPR2P25090 351 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 RBM11P57052 281 aaKnown RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 LYZP61626 148 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 SRSF6Q13247 344 aaKnown RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 EXOSC7Q15024 291 aaKnown RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 KCNMB1Q16558 191 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 DEFB110Q30KQ9 67 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 CLEC14AQ86T13 490 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 NEURL3Q96EH8 262 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 NAA50Q9GZZ1 169 aaKnown RBP8.06□□□□□ -1.12
NIPBL-202ENST00000448238 FZD8Q9H461 694 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 SIRT5Q9NXA8 310 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 FUT9Q9Y231 359 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 GPR45Q9Y5Y3 372 aa8.06□□□□□ -1.12
NIPBL-202ENST00000448238 K7ESF4 209 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 AKR7A2O43488 359 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 LEPROTL1O95214 131 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 HOXA6P31267 233 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 MYBPHQ13203 477 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 GCSAMLQ5JQS6 135 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 TNFRSF13CQ96RJ3 184 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 A4GALTQ9NPC4 353 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 TREX1Q9NSU2 369 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 PREX2Q70Z35 1606 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 TRAV21A0A0B4J279 112 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 A0A1B0GV90 55 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 H3BP45 60 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 EVX1P49640 407 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 S100A7L2Q5SY68 101 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 LIAT1Q6ZQX7 453 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 FBXL6Q8N531 539 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 FAM117AQ9C073 453 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 ZNF385DQ9H6B1 395 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 TRAV39A0A0B4J263 110 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 HMSDA8MTL9 139 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 HLA-DQA1P01909 254 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 ID4P47928 161 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 C1orf140Q5VVS0 124 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 MRGPRGQ86SM5 289 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 SGMS2Q8NHU3 365 aa8.05□□□□□ -1.12
NIPBL-202ENST00000448238 ZNF418Q8TF45 676 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms