RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 CPNE2Q96FN4 548 aaPredicted RBP6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 KCTD7Q96MP8 289 aa6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 GPER1Q99527 375 aa6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 GFI1Q99684 422 aa6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 UQCC2Q9BRT2 126 aa6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 RNF167Q9H6Y7 350 aa6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 CNTD2Q9H8S5 307 aa6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 RASL12Q9NYN1 266 aa6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 MTCH1Q9NZJ7 389 aa6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 POLDIP2Q9Y2S7 368 aa6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 AK6Q9Y3D8 172 aaKnown RBP6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 ARID1AO14497 2285 aa6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 ANKRD17O75179 2603 aaKnown RBP6.34□□□□□ -1.39
AC004540.1-206ENST00000448056 PPIAL4EA0A075B759 164 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 IGKV1-12A0A0C4DH73 117 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 VWC2LB2RUY7 222 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 CLDN25C9JDP6 229 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 PPIAL4DF5H284 164 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 NDUFS8O00217 210 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 PDCD5O14737 125 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 WNT9BO14905 357 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 AKR7A2O43488 359 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 SPRY1O43609 319 aaPredicted RBP6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 ANGPTL7O43827 346 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNF205O95201 554 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 FSTL3O95633 263 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 CYB5AP00167 134 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 PLATP00750 562 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 IGKV1D-12P01611 117 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 PGA5P0DJD9 388 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 PPIAL4FP0DN26 164 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 VAMP1P23763 118 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 MYL9P24844 172 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 SDC2P34741 201 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 NR4A2P43354 598 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 OR3A4PP47883 348 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 MTNR1BP49286 362 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 POU3F4P49335 361 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 ERVK11-1P61568 191 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 LSM3P62310 102 aaKnown RBP6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 HOXA4Q00056 320 aaPredicted RBP6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 ZMYND11Q15326 602 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 CTF1Q16619 201 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 Q5PR19 223 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 C1orf100Q5SVJ3 147 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 FAM201AQ5SY85 155 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 SFRP4Q6FHJ7 346 aaPredicted RBP6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 ASCL4Q6XD76 172 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 SLC16A12Q6ZSM3 486 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 LRRC28Q86X40 367 aaPredicted RBP6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 JAGN1Q8N5M9 183 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 GCSAMQ8N6F7 178 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 BOLLQ8N9W6 283 aaKnown RBP6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 PNLDC1Q8NA58 520 aaKnown RBP6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 POC1AQ8NBT0 407 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 PXT1Q8NFP0 134 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 OR5D18Q8NGL1 313 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 TNFAIP8L1Q8WVP5 186 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 RAB1CQ92928 201 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 SLAMF9Q96A28 289 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 TIMD4Q96H15 378 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 ZNF488Q96MN9 340 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 NKX3-1Q99801 234 aaPredicted RBP6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 NRIP2Q9BQI9 281 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 NAA50Q9GZZ1 169 aaKnown RBP6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 WDR13Q9H1Z4 485 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 TMEM165Q9HC07 324 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 ITGB1BP2Q9UKP3 347 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 ING4Q9UNL4 249 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 PPIAL4AQ9Y536 164 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 NPTNQ9Y639 398 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 V9GY05 133 aa6.33□□□□□ -1.4
AC004540.1-206ENST00000448056 IGHV4-30-2A0A087WSY4 118 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 OOEPA6NGQ2 149 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 SRRM5B3KS81 715 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 F8VVB4 439 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 F8VWA3 439 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 TRAPPC2LH3BP13 241 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 LGALS8O00214 317 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 TNFRSF13BO14836 293 aaPredicted RBP6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 SLC22A1O15245 554 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 KDM4BO94953 1096 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 NXPH2O95156 264 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 GABARAPO95166 117 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 CDRT1O95170 752 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 IGHV2-70P01814 119 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 SFTPBP07988 381 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 MUC1P15941 1255 aaPredicted RBP6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 EGR1P18146 543 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 RAB3BP20337 219 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 BCL3P20749 454 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 GLRA1P23415 457 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 TGFBR1P36897 503 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 GPR6P46095 362 aaPredicted RBP6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 NPBWR2P48146 333 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 TMBIM6P55061 237 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 OR10A3P58181 314 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 GMFBP60983 142 aa6.32□□□□□ -1.4
AC004540.1-206ENST00000448056 VBP1P61758 197 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms