RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 RPS12P25398 132 aaKnown RBP2.78□□□□□ -1.96
PMS1-216ENST00000447734 PSMA1P25786 263 aaKnown RBP2.78□□□□□ -1.96
PMS1-216ENST00000447734 RCVRNP35243 200 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 SSTR5P35346 364 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 IFNGR2P38484 337 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 IDH2P48735 452 aaKnown RBP2.78□□□□□ -1.96
PMS1-216ENST00000447734 ACOT2P49753 483 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 PPOXP50336 477 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 CXCR4P61073 352 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 RPL23P62829 140 aaKnown RBP2.78□□□□□ -1.96
PMS1-216ENST00000447734 ARG2P78540 354 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 FAM3AP98173 230 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 AESQ08117 197 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 TMED2Q15363 201 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 KRTAP24-1Q3LI83 254 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 TTMPQ5BVD1 217 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 CLEC12AQ5QGZ9 265 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 SPOPLQ6IQ16 392 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 XKRXQ6PP77 449 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 CD200R1LQ6Q8B3 271 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 OPN5Q6U736 354 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 ACP7Q6ZNF0 438 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 FAM183BPQ6ZVS7 135 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 FAM19A5Q7Z5A7 132 aaPredicted RBP2.78□□□□□ -1.96
PMS1-216ENST00000447734 ZNF440Q8IYI8 595 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 WDSUB1Q8N9V3 476 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 C20orf203Q8NBC4 194 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 OR52E4Q8NGH9 312 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 OR10C1Q96KK4 312 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 C1orf147Q96MC9 270 aaPredicted RBP2.78□□□□□ -1.96
PMS1-216ENST00000447734 WFIKKN1Q96NZ8 548 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 SUCNR1Q9BXA5 334 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 BCL2L14Q9BZR8 327 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 UBXN6Q9BZV1 441 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 SLC22A4Q9H015 551 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 TPK1Q9H3S4 243 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 SLC2A9Q9NRM0 540 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 TMEM9Q9P0T7 183 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 NUFIP1Q9UHK0 495 aaKnown RBP2.78□□□□□ -1.96
PMS1-216ENST00000447734 PRO0628Q9UI54 55 aa2.78□□□□□ -1.96
PMS1-216ENST00000447734 SAMHD1Q9Y3Z3 626 aaKnown RBP2.78□□□□□ -1.96
PMS1-216ENST00000447734 C2orf16Q68DN1 1984 aa2.78□□□□□ -1.97
PMS1-216ENST00000447734 ASTN1O14525 1302 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 TRAV19A0A0A6YYK7 116 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 TRAV8-2A0A0B4J237 113 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 PLAC8L1A1L4L8 177 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 METTL15A6NJ78 407 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 SRRM5B3KS81 715 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 PRSS44E7EML9 344 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 MANBAO00462 879 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 UPK2O00526 184 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 TAAR5O14804 337 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 P0C879 139 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 CD99P14209 185 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 CRISP2P16562 243 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 AKR1C4P17516 323 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 TAC1P20366 129 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 SLCO1A2P46721 670 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 CAPZBP47756 277 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 LGALS7P47929 136 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 SLC18A1P54219 525 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 CCL23P55773 120 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 RIPPLY3P57055 190 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 LSM6P62312 80 aaKnown RBP2.77□□□□□ -1.97
PMS1-216ENST00000447734 CCL7P80098 99 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 ADIGQ0VDE8 80 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 SNCBQ16143 134 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 SYPL2Q5VXT5 272 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 KCTD16Q68DU8 428 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 LYPD2Q6UXB3 125 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 ZNF497Q6ZNH5 498 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 DGAT2L6Q6ZPD8 337 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 FAM231DQ6ZW35 169 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 C9orf106Q8NAJ2 232 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 ZNF485Q8NCK3 441 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 OR5B17Q8NGF7 314 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 CASTOR1Q8WTX7 329 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 DCAKDQ8WVC6 231 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 ANKRD9Q96BM1 317 aaPredicted RBP2.77□□□□□ -1.97
PMS1-216ENST00000447734 DGCR14Q96DF8 476 aaKnown RBP2.77□□□□□ -1.97
PMS1-216ENST00000447734 SMIM8Q96KF7 97 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 PACRGQ96M98 296 aaPredicted RBP2.77□□□□□ -1.97
PMS1-216ENST00000447734 OR2M2Q96R28 347 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 PLEKHF1Q96S99 279 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 TIMM17AQ99595 171 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 HSD17B10Q99714 261 aaKnown RBP2.77□□□□□ -1.97
PMS1-216ENST00000447734 MS4A6AQ9H2W1 248 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 MAP1LC3AQ9H492 121 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 DMAC2Q9NW81 257 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.77□□□□□ -1.97
PMS1-216ENST00000447734 ENPP4Q9Y6X5 453 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 TMEM131Q92545 1883 aa2.77□□□□□ -1.97
PMS1-216ENST00000447734 NPHP4O75161 1426 aaPredicted RBP2.76□□□□□ -1.97
PMS1-216ENST00000447734 TNRQ92752 1358 aa2.76□□□□□ -1.97
PMS1-216ENST00000447734 IGKV1-27A0A075B6S5 117 aa2.76□□□□□ -1.97
PMS1-216ENST00000447734 A0A1B0GXF2 115 aa2.76□□□□□ -1.97
PMS1-216ENST00000447734 ZFP92A6NM28 416 aa2.76□□□□□ -1.97
PMS1-216ENST00000447734 ZNF705GA8MUZ8 300 aaPredicted RBP2.76□□□□□ -1.97
PMS1-216ENST00000447734 DNASE2O00115 360 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms