RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 IGLV3-1P01715 115 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 PGA5P0DJD9 388 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 FAHP16930 419 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 GABRA5P31644 462 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 SAA4P35542 130 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 HAAOP46952 286 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 FUT6P51993 359 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 PROK1P58294 105 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 DEFA6Q01524 100 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 EMX1Q04741 257 aaPredicted RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 MEF2CQ06413 473 aaPredicted RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 DBPQ10586 325 aaPredicted RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 IL24Q13007 206 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 HERPUD1Q15011 391 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 CNN3Q15417 329 aaKnown RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 ATP6AP1Q15904 470 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 PDLIM3Q53GG5 364 aaPredicted RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 TMEM244Q5VVB8 128 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 TMEM236Q5W0B7 351 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 FAM220AQ7Z4H9 259 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 PDZD9Q8IXQ8 264 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 MKXQ8IYA7 352 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 Q8N7P7 452 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 TCEANCQ8N8B7 351 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 YIPF7Q8N8F6 280 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 HPSE2Q8WWQ2 592 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 MALSU1Q96EH3 234 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 SSX3Q99909 188 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 RBM4BQ9BQ04 359 aaKnown RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 OCSTAMPQ9BR26 566 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 SLC22A13Q9Y226 551 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 TBL2Q9Y4P3 447 aaKnown RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 MAB21L2Q9Y586 359 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 AP4S1Q9Y587 144 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 V9GYS6 101 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 hADV38S2A0JD32 116 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 SYT7O43581 403 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 MRPL3P09001 348 aaKnown RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 CSF1P09603 554 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 OCM2P0CE71 109 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 OCMP0CE72 109 aaPredicted RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 PRKACBP22694 351 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 PEX2P28328 305 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 DAPP51397 102 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 ATP1B3P54709 279 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 CDC42P60953 191 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 CXCR4P61073 352 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 Q6ZSR3 168 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 Q6ZSV7 163 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 ASRGL1Q7L266 308 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 GDPD3Q7L5L3 318 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 BBS1Q8NFJ9 593 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 OR8J1Q8NGP2 316 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 PP6455Q8WZ26 134 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 TNFRSF14Q92956 283 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 UTP4Q969X6 686 aaKnown RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 WDR13Q9H1Z4 485 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 PPA2Q9H2U2 334 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 RHOFQ9HBH0 211 aa6.36□□□□□ -1.39
CD44-211ENST00000442151 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.36□□□□□ -1.39
CD44-211ENST00000442151 IGKV1D-17A0A075B6S4 117 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 PQLC2LA1A4F0 135 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 CCDC182A6NF36 153 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 ZAR1LA6NP61 321 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 PRKYO43930 277 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 PEX14O75381 377 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 RHBDL1O75783 438 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 TTRP02766 147 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 TK1P04183 234 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 UBCP0CG48 685 aaKnown RBP6.35□□□□□ -1.39
CD44-211ENST00000442151 AMY2BP19961 511 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 HTR1FP30939 366 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 HCCSP53701 268 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 OR12D2P58182 307 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 ACTC1P68032 377 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 ACTA1P68133 377 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 OXLD1Q5BKU9 147 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 AADACL4Q5VUY2 407 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 MEDAGQ5VYS4 303 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 TMEM42Q69YG0 159 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 C12orf73Q69YU5 71 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 ASPHD2Q6ICH7 369 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 OR52W1Q6IF63 320 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 ZNRF1Q8ND25 227 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 DNAAF1Q8NEP3 725 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 OR14K1Q8NGZ2 314 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 HAVCR2Q8TDQ0 301 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 CAPSLQ8WWF8 208 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 CREB3L1Q96BA8 519 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 BORCS8Q96FH0 119 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 SNX22Q96L94 193 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 IL4I1Q96RQ9 567 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 APOL4Q9BPW4 351 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 GPR173Q9NS66 373 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 ZNF222Q9UK12 451 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 KLHDC2Q9Y2U9 406 aa6.35□□□□□ -1.39
CD44-211ENST00000442151 FAM230AA0A1W2PPH8 454 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 A0A1W2PRD5 423 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 A0A1W2PRF3 423 aa6.34□□□□□ -1.39
CD44-211ENST00000442151 A0A1W2PRM7 423 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms