RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 SNTNA6NMZ2 147 aa15.39■□□□□ 0.05
CCDC78-204ENST00000439619 MPZP25189 248 aa15.39■□□□□ 0.05
CCDC78-204ENST00000439619 PRB3Q04118 309 aaPredicted RBP15.39■□□□□ 0.05
CCDC78-204ENST00000439619 IL24Q13007 206 aa15.39■□□□□ 0.05
CCDC78-204ENST00000439619 Q6ZSR3 168 aa15.39■□□□□ 0.05
CCDC78-204ENST00000439619 CATSPERDQ86XM0 798 aa15.39■□□□□ 0.05
CCDC78-204ENST00000439619 C10orf67Q8IYJ2 551 aa15.39■□□□□ 0.05
CCDC78-204ENST00000439619 CD177Q8N6Q3 437 aa15.39■□□□□ 0.05
CCDC78-204ENST00000439619 LINC01006Q8NI28 216 aa15.39■□□□□ 0.05
CCDC78-204ENST00000439619 TRMT10AQ8TBZ6 339 aaKnown RBP15.39■□□□□ 0.05
CCDC78-204ENST00000439619 C10orf35Q96D05 121 aa15.39■□□□□ 0.05
CCDC78-204ENST00000439619 MYCBPQ99417 103 aaPredicted RBP15.39■□□□□ 0.05
CCDC78-204ENST00000439619 USE1Q9NZ43 259 aa15.39■□□□□ 0.05
CCDC78-204ENST00000439619 APOL3O95236 402 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 CYB5AP00167 134 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 UBCP0CG48 685 aaKnown RBP15.38■□□□□ 0.05
CCDC78-204ENST00000439619 POLR2IP36954 125 aaKnown RBP15.38■□□□□ 0.05
CCDC78-204ENST00000439619 FUT6P51993 359 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 LGALS4P56470 323 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 ACTC1P68032 377 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 ACTA1P68133 377 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 CNN3Q15417 329 aaKnown RBP15.38■□□□□ 0.05
CCDC78-204ENST00000439619 TAF9Q16594 264 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 SSX6Q7RTT6 188 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 ZSCAN4Q8NAM6 433 aaPredicted RBP15.38■□□□□ 0.05
CCDC78-204ENST00000439619 BEND2Q8NDZ0 799 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 EME1Q96AY2 570 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 C19orf12Q9NSK7 152 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 GNG8Q9UK08 70 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 MGAM2Q2M2H8 2515 aa15.38■□□□□ 0.05
CCDC78-204ENST00000439619 TK1P04183 234 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 DLX1P56177 255 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 ERVFRD-1P60508 538 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 KCTD20Q7Z5Y7 419 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 ANGPTL5Q86XS5 388 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 CALHM1Q8IU99 346 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 PNKDQ8N490 385 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 DTX3Q8N9I9 347 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 ASCC1Q8N9N2 400 aaKnown RBP15.37■□□□□ 0.05
CCDC78-204ENST00000439619 PP6455Q8WZ26 134 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 RORBQ92753 470 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 BORCS8Q96FH0 119 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 MRPL48Q96GC5 212 aaKnown RBP15.37■□□□□ 0.05
CCDC78-204ENST00000439619 CEP19Q96LK0 163 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 CITED1Q99966 193 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 HES4Q9HCC6 221 aa15.37■□□□□ 0.05
CCDC78-204ENST00000439619 CHRM2P08172 466 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 OCM2P0CE71 109 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 OCMP0CE72 109 aaPredicted RBP15.36■□□□□ 0.05
CCDC78-204ENST00000439619 TMEM244Q5VVB8 128 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 MEDAGQ5VYS4 303 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 TMEM200BQ69YZ2 307 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 ZFP1Q6P2D0 407 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 GDPD3Q7L5L3 318 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 Q8IYB0 196 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 OR4M1Q8NGD0 313 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 PYDC1Q8WXC3 89 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 CHST5Q9GZS9 411 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 C16orf95Q9H693 158 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 TCF7L1Q9HCS4 588 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 RAB18Q9NP72 206 aa15.36■□□□□ 0.05
CCDC78-204ENST00000439619 DAPL1A0PJW8 107 aa15.35■□□□□ 0.05
CCDC78-204ENST00000439619 CLPXO76031 633 aa15.35■□□□□ 0.05
CCDC78-204ENST00000439619 CEBPDP49716 269 aaPredicted RBP15.35■□□□□ 0.05
CCDC78-204ENST00000439619 ERVK11-1P61568 191 aa15.35■□□□□ 0.05
CCDC78-204ENST00000439619 AANATQ16613 207 aa15.35■□□□□ 0.05
CCDC78-204ENST00000439619 Q6ZSV7 163 aa15.35■□□□□ 0.05
CCDC78-204ENST00000439619 MKXQ8IYA7 352 aa15.35■□□□□ 0.05
CCDC78-204ENST00000439619 ENTHD1Q8IYW4 607 aa15.35■□□□□ 0.05
CCDC78-204ENST00000439619 UBE2FQ969M7 185 aa15.35■□□□□ 0.05
CCDC78-204ENST00000439619 SSX3Q99909 188 aa15.35■□□□□ 0.05
CCDC78-204ENST00000439619 PPA2Q9H2U2 334 aa15.35■□□□□ 0.05
CCDC78-204ENST00000439619 LOC107986453A0A1B0GWG9 222 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 H3BSH0 61 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 H3BUX3 64 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 K7N7A8 449 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 TSPAN9O75954 239 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 ZNF20P17024 532 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 RBP2P50120 134 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 ATP1B3P54709 279 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 PROK1P58294 105 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 COL10A1Q03692 680 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 SRSF4Q08170 494 aaKnown RBP15.34■□□□□ 0.05
CCDC78-204ENST00000439619 UBE2V2Q15819 145 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 OCLNQ16625 522 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 LRRC75BQ2VPJ9 315 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 TP53I3Q53FA7 332 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 EGFL6Q8IUX8 553 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 BATF2Q8N1L9 274 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 DNAAF1Q8NEP3 725 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 RNFT2Q96EX2 444 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 HRASLS5Q96KN8 279 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 NEK6Q9HC98 313 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 GLS2Q9UI32 602 aa15.34■□□□□ 0.05
CCDC78-204ENST00000439619 MEGF8Q7Z7M0 2845 aa15.33■□□□□ 0.04
CCDC78-204ENST00000439619 ALPLP05186 524 aa15.33■□□□□ 0.04
CCDC78-204ENST00000439619 PIPP12273 146 aaPredicted RBP15.33■□□□□ 0.04
CCDC78-204ENST00000439619 PRKACBP22694 351 aa15.33■□□□□ 0.04
CCDC78-204ENST00000439619 EDDM3BP56851 147 aa15.33■□□□□ 0.04
CCDC78-204ENST00000439619 SLC25A30Q5SVS4 291 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms