RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SPRNQ5BIV9 151 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 UBE2NLQ5JXB2 153 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 ZNF826PQ6ZT77 177 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 CDH24Q86UP0 819 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 SAMD12Q8N8I0 201 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 OR5H6Q8NGV6 325 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 OR10K1Q8NGX5 313 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 LRRC29Q8WV35 223 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 MRPS24Q96EL2 167 aaKnown RBP17.49■□□□□ 0.39
CHD3-204ENST00000439235 TMEM59Q9BXS4 323 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 KCNK15Q9H427 330 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 RAB22AQ9UL26 194 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 PTPN13Q12923 2485 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 PLCE1Q9P212 2302 aa17.49■□□□□ 0.39
CHD3-204ENST00000439235 LRRC30A6NM36 301 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 CDC14BO60729 498 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 MPIG6BO95866 241 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 BCL3P20749 454 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 ART1P52961 327 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 ZNF181Q2M3W8 571 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 ELP2Q6IA86 826 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 FAM46BQ96A09 425 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 NRIP2Q9BQI9 281 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 URM1Q9BTM9 101 aaKnown RBP17.48■□□□□ 0.39
CHD3-204ENST00000439235 CXorf56Q9H5V9 222 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 RHBDL2Q9NX52 303 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 RNF7Q9UBF6 113 aa17.48■□□□□ 0.39
CHD3-204ENST00000439235 CTDSP2O14595 271 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 HPGDSO60760 199 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 HPXP02790 462 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 MGMTP16455 207 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 FGF12P61328 243 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 ERVK11-1P61568 191 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 UNC119Q13432 240 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 OR10K2Q6IF99 312 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 LINC00299Q6ZSB3 139 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 LRRC28Q86X40 367 aaPredicted RBP17.47■□□□□ 0.39
CHD3-204ENST00000439235 C1orf87Q8N0U7 546 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 OSR2Q8N2R0 312 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 TMEM104Q8NE00 496 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 Q8NFD4 153 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 RAB40AQ8WXH6 277 aa17.47■□□□□ 0.39
CHD3-204ENST00000439235 EMG1Q92979 244 aaKnown RBP17.47■□□□□ 0.39
CHD3-204ENST00000439235 RBFOX1Q9NWB1 397 aaKnown RBP17.47■□□□□ 0.39
CHD3-204ENST00000439235 IGHV1-69-2A0A0G2JMI3 117 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 METTL21EPA6NDL7 271 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 FAM25AB3EWG3 89 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 FAM25CB3EWG5 89 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 FAM25GB3EWG6 89 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 OVOL3O00110 214 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 AKR7A2O43488 359 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 NXPH2O95156 264 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 APOA1P02647 267 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 SFTPBP07988 381 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 CDKN1AP38936 164 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 PMELP40967 661 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 NPBWR2P48146 333 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 FIP1L1Q6UN15 594 aaKnown RBP17.46■□□□□ 0.39
CHD3-204ENST00000439235 LAX1Q8IWV1 398 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 FAM58AQ8N1B3 248 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 OR6Q1Q8NGQ2 317 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 IGFBPL1Q8WX77 278 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 SLC25A38Q96DW6 304 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 ZNF488Q96MN9 340 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 WDFY2Q96P53 400 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 ABCG5Q9H222 651 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 BANF2Q9H503 90 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 RASL12Q9NYN1 266 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 NPTNQ9Y639 398 aa17.46■□□□□ 0.39
CHD3-204ENST00000439235 LRRK2Q5S007 2527 aa17.46■□□□□ 0.38
CHD3-204ENST00000439235 A0A1W2PP11 408 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 SRRM5B3KS81 715 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 SCGNO76038 276 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 GLRA1P23415 457 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 CPT2P23786 658 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 RPS27AP62979 156 aaKnown RBP17.45■□□□□ 0.38
CHD3-204ENST00000439235 MRPS11P82912 194 aaKnown RBP17.45■□□□□ 0.38
CHD3-204ENST00000439235 HFEQ30201 348 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 SMIM21Q3B7S5 101 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 NHLRC3Q5JS37 347 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 ZNF787Q6DD87 383 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 BATF2Q8N1L9 274 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 PHF21AQ96BD5 680 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 SELENOIQ9C0D9 397 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 MIXL1Q9H2W2 232 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 HES4Q9HCC6 221 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 HMG20AQ9NP66 347 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 DLL4Q9NR61 685 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 TMEM106BQ9NUM4 274 aa17.45■□□□□ 0.38
CHD3-204ENST00000439235 EIF4EP06730 217 aaKnown RBP17.44■□□□□ 0.38
CHD3-204ENST00000439235 PRKACAP17612 351 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 TALDO1P37837 337 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 EFNB2P52799 333 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 RBM11P57052 281 aaKnown RBP17.44■□□□□ 0.38
CHD3-204ENST00000439235 PLA2G7Q13093 441 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 GCSAMQ8N6F7 178 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 CCL17Q92583 94 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 RDH5Q92781 318 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 POM121Q96HA1 1249 aa17.44■□□□□ 0.38
CHD3-204ENST00000439235 Q96M66 194 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms