RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 SLAMF9Q96A28 289 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 RFT1Q96AA3 541 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 C10orf35Q96D05 121 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 ORAI1Q96D31 301 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 SDSLQ96GA7 329 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 TMEM80Q96HE8 168 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 MRI1Q9BV20 369 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 PKIBQ9C010 78 aa10.95□□□□□ -0.66
LINC00399-201ENST00000439008 PAK1IP1Q9NWT1 392 aaPredicted RBP10.95□□□□□ -0.66
LINC00399-201ENST00000439008 TRAV40A0A0B4J280 105 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 IGKV1-12A0A0C4DH73 117 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 TRBV2A0A0J9YWF9 115 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 TMEM212A6NML5 194 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 RNF212BA8MTL3 300 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 SPRY1O43609 319 aaPredicted RBP10.94□□□□□ -0.66
LINC00399-201ENST00000439008 GATBO75879 557 aaKnown RBP10.94□□□□□ -0.66
LINC00399-201ENST00000439008 IGKV1D-12P01611 117 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 PPIAL4GP0DN37 164 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 CALCBP10092 127 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 PIPP12273 146 aaPredicted RBP10.94□□□□□ -0.66
LINC00399-201ENST00000439008 AZGP1P25311 298 aaKnown RBP10.94□□□□□ -0.66
LINC00399-201ENST00000439008 FUT6P51993 359 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 ARF6P62330 175 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 IL13RA1P78552 427 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 BTNL3Q6UXE8 466 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 SLC25A26Q70HW3 274 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 AHSA2Q719I0 299 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 SLC36A1Q7Z2H8 476 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 Q8N7P7 452 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 BPIFB6Q8NFQ5 453 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 OR51A2Q8NGJ7 313 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 OR13C9Q8NGT0 318 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 MRPL48Q96GC5 212 aaKnown RBP10.94□□□□□ -0.66
LINC00399-201ENST00000439008 C1orf147Q96MC9 270 aaPredicted RBP10.94□□□□□ -0.66
LINC00399-201ENST00000439008 NKX3-1Q99801 234 aaPredicted RBP10.94□□□□□ -0.66
LINC00399-201ENST00000439008 DCTN5Q9BTE1 182 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 DNTTIP1Q9H147 329 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 BABAM2Q9NXR7 383 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 NUP50Q9UKX7 468 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 SLC7A11Q9UPY5 501 aa10.94□□□□□ -0.66
LINC00399-201ENST00000439008 EXOSC1Q9Y3B2 195 aaKnown RBP10.94□□□□□ -0.66
LINC00399-201ENST00000439008 ZNF879B4DU55 563 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 H0YJX3 145 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 NDUFB3O43676 98 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 TCF21O43680 179 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 NXPH2O95156 264 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 ZNF20P17024 532 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 PRDX2P32119 198 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 SOX2P48431 317 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 RPS11P62280 158 aaKnown RBP eCLIP10.93□□□□□ -0.66
LINC00399-201ENST00000439008 ARMCX4Q5H9R4 360 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 C6orf141Q5SZD1 244 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 CD276Q5ZPR3 534 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 RUSC1-AS1Q66K80 236 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 DMKNQ6E0U4 476 aaPredicted RBP10.93□□□□□ -0.66
LINC00399-201ENST00000439008 ZNF529Q6P280 563 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 BRD3OSQ6XYD6 125 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 PARP16Q8N5Y8 322 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 ZDHHC22Q8N966 263 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 DNAAF1Q8NEP3 725 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 OR52N1Q8NH53 320 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 C8orf46Q8TAG6 207 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 BORCS8Q96FH0 119 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 WDFY2Q96P53 400 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 PCGF1Q9BSM1 259 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 RASL12Q9NYN1 266 aa10.93□□□□□ -0.66
LINC00399-201ENST00000439008 CNOT2Q9NZN8 540 aaKnown RBP10.93□□□□□ -0.66
LINC00399-201ENST00000439008 SLC25A10Q9UBX3 287 aaPredicted RBP10.93□□□□□ -0.66
LINC00399-201ENST00000439008 CENPVL3A0A0U1RRI6 287 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 MDFIC2A0A1B0GVS7 189 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 EFCAB10A6NFE3 127 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 ANGPTL7O43827 346 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 SERPINA3P01011 423 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 MT-ND2P03891 347 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 BCL3P20749 454 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 RBP2P50120 134 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 MTCP1P56278 107 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 CAV3P56539 151 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 HILS1P60008 231 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 MRPL28Q13084 256 aaKnown RBP10.92□□□□□ -0.66
LINC00399-201ENST00000439008 CNN3Q15417 329 aaKnown RBP10.92□□□□□ -0.66
LINC00399-201ENST00000439008 SMIM21Q3B7S5 101 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 RPL22L1Q6P5R6 122 aaKnown RBP10.92□□□□□ -0.66
LINC00399-201ENST00000439008 SIGLECL1Q8N7X8 197 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 OR5D18Q8NGL1 313 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 H1FXQ92522 213 aaKnown RBP10.92□□□□□ -0.66
LINC00399-201ENST00000439008 MED30Q96HR3 178 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 PGLYRP3Q96LB9 341 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 CEP19Q96LK0 163 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 ZCCHC4Q9H5U6 513 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 CNTD2Q9H8S5 307 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 C19orf12Q9NSK7 152 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 RBFOX1Q9NWB1 397 aaKnown RBP10.92□□□□□ -0.66
LINC00399-201ENST00000439008 OR14J1Q9UGF5 321 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 POLDIP2Q9Y2S7 368 aa10.92□□□□□ -0.66
LINC00399-201ENST00000439008 IRGMA1A4Y4 181 aa10.91□□□□□ -0.66
LINC00399-201ENST00000439008 NKX6-3A6NJ46 265 aa10.91□□□□□ -0.66
LINC00399-201ENST00000439008 SLC1A7O00341 560 aa10.91□□□□□ -0.66
LINC00399-201ENST00000439008 ZNF737O75373 536 aa10.91□□□□□ -0.66
LINC00399-201ENST00000439008 TOX4O94842 621 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms