RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ANKRD60Q9BZ19 345 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 AUNIPQ9H7T9 357 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 C12orf10Q9HB07 376 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 CLN8Q9UBY8 286 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 HMGXB4Q9UGU5 601 aa1.59□□□□□ -2.15
HMGB1P31-201ENST00000437242 NAV3Q8IVL0 2385 aa1.59□□□□□ -2.16
HMGB1P31-201ENST00000437242 NIPBLQ6KC79 2804 aaeCLIP1.59□□□□□ -2.16
HMGB1P31-201ENST00000437242 HRNRQ86YZ3 2850 aaPredicted RBP1.59□□□□□ -2.16
HMGB1P31-201ENST00000437242 PRRC2CQ9Y520 2896 aaKnown RBP1.59□□□□□ -2.16
HMGB1P31-201ENST00000437242 SVILO95425 2214 aa1.59□□□□□ -2.16
HMGB1P31-201ENST00000437242 CCDC88CQ9P219 2028 aa1.59□□□□□ -2.16
HMGB1P31-201ENST00000437242 MTORP42345 2549 aa1.59□□□□□ -2.16
HMGB1P31-201ENST00000437242 EPPK1P58107 5090 aaKnown RBP1.59□□□□□ -2.16
HMGB1P31-201ENST00000437242 KCNE1BA0A087WTH5 132 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 GOLGA6L7A0A1B0GV03 622 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 VPS37CA5D8V6 355 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 F8VP50 259 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 C19orf84I3L1E1 186 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 RAD51BO15315 384 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 TRAPPC3O43617 180 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 CACNG3O60359 315 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 GCM2O75603 506 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 LYPLA2O95372 231 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 CTSLP07711 333 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 TPM2P07951 284 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 ERCC1P07992 297 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 CD3GP09693 182 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 C1GALT1C1LP0DN25 315 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 CCL4P13236 92 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 MUC1P15941 1255 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 GGT1P19440 569 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 GALP22466 123 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 F8A1P23610 371 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 HMOX2P30519 316 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 CD70P32970 193 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 SSTR5P35346 364 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 HCAR3P49019 387 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 P2RX1P51575 399 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 RND2P52198 227 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 SYNJ2BPP57105 145 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 PPP1CBP62140 327 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 TRDNQ13061 729 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 KIR2DS1Q14954 304 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 DEFB133Q30KQ1 61 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 GPR107Q5VW38 600 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 TMEM220Q6QAJ8 160 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 PLET1Q6UQ28 207 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 MBOAT2Q6ZWT7 520 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 EIF3MQ7L2H7 374 aaKnown RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 CALHM1Q8IU99 346 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 ZBTB8OSQ8IWT0 167 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 RIMKLAQ8IXN7 391 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 BLIDQ8IZY5 108 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 NPWQ8N729 165 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 TMEM161BQ8NDZ6 487 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR5B17Q8NGF7 314 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR52E2Q8NGJ4 325 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 OR9G4Q8NGQ1 327 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 COQ8AQ8NI60 647 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 NUBPLQ8TB37 319 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 PIFOQ8TCI5 191 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 APH1BQ8WW43 257 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 DEDD2Q8WXF8 326 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 RGP1Q92546 391 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 EEF1AKMT3Q96AZ1 226 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 TIMM17AQ99595 171 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 C11orf70Q9BRQ4 267 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 CCDC94Q9BW85 323 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 BBS2Q9BXC9 721 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 ZYG11BQ9C0D3 744 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 LHX5Q9H2C1 402 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 SPNS1Q9H2V7 528 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 CHMP4BQ9H444 224 aaKnown RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 C6orf50Q9HD87 102 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 MRPS30Q9NP92 439 aaKnown RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 PRSS16Q9NQE7 514 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 C20orf96Q9NUD7 363 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 HYOU1Q9Y4L1 999 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 RFNGQ9Y644 331 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 MDC1Q14676 2089 aaKnown RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 FN1P02751 2386 aaKnown RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 PHLPP2Q6ZVD8 1323 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 ESPL1Q14674 2120 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 RTTNQ86VV8 2226 aa1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 ANKHD1Q8IWZ3 2542 aaKnown RBP1.58□□□□□ -2.16
HMGB1P31-201ENST00000437242 NBEAL1Q6ZS30 2694 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 UNC13CQ8NB66 2214 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 GOLGA8IPA6NC78 632 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 GOLGA8JA6NMD2 632 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 PDZK1P1A8MUH7 402 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 K7EMT4 169 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 DNASE2O00115 360 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 WRBO00258 174 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 EIF3HO15372 352 aaKnown RBP eCLIP1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 RBFOX2O43251 390 aaKnown RBP eCLIP1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 ZNF207O43670 478 aaKnown RBP1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 SEMA3DO95025 777 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 LSM8O95777 96 aaKnown RBP1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 HBE1P02100 147 aa1.57□□□□□ -2.16
HMGB1P31-201ENST00000437242 APCSP02743 223 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms