RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 GATBO75879 557 aaKnown RBP14.07□□□□□ -0.16
UBE3D-204ENST00000430071 SERPINA3P01011 423 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 CPEP16870 476 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 PITPNBP48739 271 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 GPR50Q13585 617 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 INSL4Q14641 139 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 Q499Y3 187 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 ARMCX4Q5H9R4 360 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 C1orf87Q8N0U7 546 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 GCSAMQ8N6F7 178 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 OR8B3Q8NGG8 313 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 OR13C9Q8NGT0 318 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 OR11L1Q8NGX0 322 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 TRMT10AQ8TBZ6 339 aaKnown RBP14.07□□□□□ -0.16
UBE3D-204ENST00000430071 RAB40AQ8WXH6 277 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 TAF15Q92804 592 aaKnown RBP eCLIP14.07□□□□□ -0.16
UBE3D-204ENST00000430071 TMEM106AQ96A25 262 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 SEH1LQ96EE3 360 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 OR14A2Q96R54 314 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 OR8B2Q96RD0 313 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 TMED9Q9BVK6 235 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 SUCNR1Q9BXA5 334 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 OR51I2Q9H344 312 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 OR5V1Q9UGF6 321 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 NUP50Q9UKX7 468 aa14.07□□□□□ -0.16
UBE3D-204ENST00000430071 IGKV1-27A0A075B6S5 117 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 IGHV3OR15-7A0A075B7D8 119 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 TRBV5-7A0A0A0MS05 114 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 A0A1B0GW55 424 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 FAM230AA0A1W2PPH8 454 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 CDIPTO14735 213 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 INMTO95050 263 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 FSTL3O95633 263 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 DUX4L2P0CJ85 424 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 DUX4L3P0CJ86 424 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 DUX4L4P0CJ87 422 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 DUX4L5P0CJ88 424 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 DUX4L6P0CJ89 424 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 DUX4L7P0CJ90 424 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 IRF2P14316 349 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 ATF1P18846 271 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 RPS25P62851 125 aaKnown RBP14.06□□□□□ -0.16
UBE3D-204ENST00000430071 SSX1Q16384 188 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 DUX4L9Q6RFH8 374 aaPredicted RBP14.06□□□□□ -0.16
UBE3D-204ENST00000430071 WDR82Q6UXN9 313 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 DCDC5Q6ZRR9 648 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 SERPINA12Q8IW75 414 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 TEX29Q8N6K0 151 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 SCCPDHQ8NBX0 429 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 TSPAN14Q8NG11 270 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 ZCCHC4Q9H5U6 513 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 SMURF1Q9HCE7 757 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 TAS2R4Q9NYW5 299 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 DUX4Q9UBX2 424 aa14.06□□□□□ -0.16
UBE3D-204ENST00000430071 SF3B6Q9Y3B4 125 aaKnown RBP14.06□□□□□ -0.16
UBE3D-204ENST00000430071 A0A1W2PPK0 400 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 ZNF879B4DU55 563 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 LGALS8O00214 317 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 GYPAP02724 150 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 CD2P06729 351 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 AZGP1P25311 298 aaKnown RBP14.05□□□□□ -0.16
UBE3D-204ENST00000430071 PSMB9P28065 219 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 UBA52P62987 128 aaKnown RBP14.05□□□□□ -0.16
UBE3D-204ENST00000430071 SCGB2A2Q13296 93 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 CNN3Q15417 329 aaKnown RBP14.05□□□□□ -0.16
UBE3D-204ENST00000430071 ZNF529Q6P280 563 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 RNF144BQ7Z419 303 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 FAM90A1Q86YD7 464 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 MS4A15Q8N5U1 240 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 OR51A2Q8NGJ7 313 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 OR5D14Q8NGL3 314 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 FAM216AQ8WUB2 273 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 ZFAND2BQ8WV99 257 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 FCGR1BQ92637 280 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 TMEM203Q969S6 136 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 TECTBQ96PL2 329 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 NR1H4Q96RI1 486 aaPredicted RBP14.05□□□□□ -0.16
UBE3D-204ENST00000430071 NUDT16L1Q9BRJ7 211 aaKnown RBP14.05□□□□□ -0.16
UBE3D-204ENST00000430071 MRI1Q9BV20 369 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 CLN8Q9UBY8 286 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 SLC7A11Q9UPY5 501 aa14.05□□□□□ -0.16
UBE3D-204ENST00000430071 A0A087WXM4 84 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 KIR2DS1A0A191URI9 304 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 MDFIC2A0A1B0GVS7 189 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 hCG_1807616A0A1W2PRN6 198 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 TRIM77I1YAP6 450 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 HAX1O00165 279 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 PIN1P1O15428 100 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 SULT1B1O43704 296 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 RHBDL1O75783 438 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 SC5DO75845 299 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 LHBP01229 141 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 FPR2P25090 351 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 CFPP27918 469 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 FUT6P51993 359 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 ACTG1P63261 375 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 NEDD8Q15843 81 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 ACSM3Q53FZ2 586 aa14.04□□□□□ -0.16
UBE3D-204ENST00000430071 HAGHLQ6PII5 290 aaPredicted RBP14.04□□□□□ -0.16
UBE3D-204ENST00000430071 CRIP3Q6Q6R5 217 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms