RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 TMEM59Q9BXS4 323 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 SLIRPQ9GZT3 109 aaKnown RBP6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 BANF2Q9H503 90 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 TMEM106BQ9NUM4 274 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 PTTG2Q9NZH5 202 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 ABRACLQ9P1F3 81 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 RNF7Q9UBF6 113 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 COMMD3Q9UBI1 195 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 DNAJB11Q9UBS4 358 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 GHRLQ9UBU3 117 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR5V1Q9UGF6 321 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 EDARQ9UNE0 448 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 ETV7Q9Y603 341 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 CACNG2Q9Y698 323 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 HRNRQ86YZ3 2850 aaPredicted RBP6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 RTTNQ86VV8 2226 aa6.68□□□□□ -1.34
HMGA1P4-201ENST00000428643 ROS1P08922 2347 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 PLCE1Q9P212 2302 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 IGHV3OR15-7A0A075B7D8 119 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 TMEM272A0A1B0GTI8 110 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 A0A1W2PP11 408 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 F8VVB4 439 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 F8VWA3 439 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 LYNX1G3V0Z9 82 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 IFNL4K9M1U5 179 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 OVOL3O00110 214 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 WNT9BO14905 357 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 NDUFS7O75251 213 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 CYB5R3P00387 301 aaPredicted RBP6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 IGHV4-39P01824 125 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 SFTPBP07988 381 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 PGA5P0DJD9 388 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 LYNX1P0DP58 116 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 VSIG8P0DPA2 414 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 CD37P11049 281 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 GTF2F2P13984 249 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 MGMTP16455 207 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 EGR1P18146 543 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 GLRA1P23415 457 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 DNASE1P24855 282 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 CD80P33681 288 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 RBMXP38159 391 aaKnown RBP6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 PMELP40967 661 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 NPBWR2P48146 333 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 BMXP51813 675 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 EFNA4P52798 201 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 ATP5J2P56134 94 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 SCAND1P57086 179 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 HOXA4Q00056 320 aaPredicted RBP6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 C2orf76Q3KRA6 126 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 ASCL4Q6XD76 172 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR2W3Q7Z3T1 314 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 TGIF2LYQ8IUE0 185 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 C11orf53Q8IXP5 236 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 C1orf87Q8N0U7 546 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 OSR2Q8N2R0 312 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 TMEM104Q8NE00 496 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR5H6Q8NGV6 325 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 OR10Z1Q8NGY1 313 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 KCNG3Q8TAE7 436 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 Q8TCH9 128 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 RDH5Q92781 318 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 PERPQ96FX8 193 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 C1orf147Q96MC9 270 aaPredicted RBP6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 SELENOIQ9C0D9 397 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 WDR13Q9H1Z4 485 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 PCDHB16Q9NRJ7 776 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 DCAF16Q9NXF7 216 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 IL36GQ9NZH8 169 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 MTCH1Q9NZJ7 389 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 NPTNQ9Y639 398 aa6.67□□□□□ -1.34
HMGA1P4-201ENST00000428643 PKDREJQ9NTG1 2253 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 ICE1Q9Y2F5 2266 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 TMEM14DPA8MWL7 114 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 FAM25AB3EWG3 89 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 FAM25CB3EWG5 89 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 FAM25GB3EWG6 89 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 SRRM5B3KS81 715 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 CLDN25C9JDP6 229 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 C3orf80F5H4A9 247 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 SSX4O60224 188 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 HPGDSO60760 199 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 NOS1APO75052 506 aaPredicted RBP6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 CLPXO76031 633 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 ZNF205O95201 554 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 RAB6AP20340 208 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 S100A5P33763 92 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 EFNB2P52799 333 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 ART1P52961 327 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 RBM11P57052 281 aaKnown RBP6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 FGF12P61328 243 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 MRPS11P82912 194 aaKnown RBP6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 DYNC1I2Q13409 638 aaKnown RBP6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 IKZF1Q13422 519 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 UNC119Q13432 240 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 PIGYQ3MUY2 71 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 UBE2NLQ5JXB2 153 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 FAM201AQ5SY85 155 aa6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 PEG10Q86TG7 708 aaKnown RBP6.66□□□□□ -1.34
HMGA1P4-201ENST00000428643 LAX1Q8IWV1 398 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms