RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 CCDC159P0C7I6 412 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 ZNF20P17024 532 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 FPR2P25090 351 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 GABRA2P47869 451 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 HILS1P60008 231 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 CNN3Q15417 329 aaKnown RBP13.78□□□□□ -0.2
VRK2-204ENST00000428021 SMIM21Q3B7S5 101 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 LRRC10Q5BKY1 277 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 BATF2Q8N1L9 274 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 BPIFB2Q8N4F0 458 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 ZNRF1Q8ND25 227 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 OR5AK2Q8NH90 309 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 ZNF418Q8TF45 676 aaPredicted RBP13.78□□□□□ -0.2
VRK2-204ENST00000428021 BORCS8Q96FH0 119 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 TMEM80Q96HE8 168 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 TBX15Q96SF7 602 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 DCTN5Q9BTE1 182 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 SIRPDQ9H106 197 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 VCXQ9H320 206 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 CNTD2Q9H8S5 307 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 MTCH1Q9NZJ7 389 aa13.78□□□□□ -0.2
VRK2-204ENST00000428021 EXOSC1Q9Y3B2 195 aaKnown RBP13.78□□□□□ -0.2
VRK2-204ENST00000428021 SIRT4Q9Y6E7 314 aaPredicted RBP13.78□□□□□ -0.2
VRK2-204ENST00000428021 TRAV40A0A0B4J280 105 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 TRBV2A0A0J9YWF9 115 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 NXPH2O95156 264 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 PIPP12273 146 aaPredicted RBP13.77□□□□□ -0.21
VRK2-204ENST00000428021 AZGP1P25311 298 aaKnown RBP13.77□□□□□ -0.21
VRK2-204ENST00000428021 CAV3P56539 151 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 ARF6P62330 175 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 ST3GAL4Q11206 333 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 CRIP3Q6Q6R5 217 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 RNF144BQ7Z419 303 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 ZNF485Q8NCK3 441 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 C8orf46Q8TAG6 207 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 HAVCR2Q8TDQ0 301 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 RGP1Q92546 391 aaPredicted RBP13.77□□□□□ -0.21
VRK2-204ENST00000428021 ZNF48Q96MX3 618 aaPredicted RBP13.77□□□□□ -0.21
VRK2-204ENST00000428021 WDFY2Q96P53 400 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 PCGF1Q9BSM1 259 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 SUCNR1Q9BXA5 334 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 PLCXD1Q9NUJ7 323 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 STAB1Q9NY15 2570 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 SLC25A10Q9UBX3 287 aaPredicted RBP13.77□□□□□ -0.21
VRK2-204ENST00000428021 PSORS1C1Q9UIG5 152 aa13.77□□□□□ -0.21
VRK2-204ENST00000428021 H0YJX3 145 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 OGG1O15527 345 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 TOX4O94842 621 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 LALBAP00709 142 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 MT-ND2P03891 347 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 PRKACBP22694 351 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 PRDX2P32119 198 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 CEBPDP49716 269 aaPredicted RBP13.76□□□□□ -0.21
VRK2-204ENST00000428021 RBP2P50120 134 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 AQP4P55087 323 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 CDK5R1Q15078 307 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 CCDC58Q4VC31 144 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 RPL22L1Q6P5R6 122 aaKnown RBP13.76□□□□□ -0.21
VRK2-204ENST00000428021 TMPRSS11AQ6ZMR5 421 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 C9orf139Q6ZV77 190 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 SLC25A26Q70HW3 274 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 OR52N1Q8NH53 320 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 SLAMF9Q96A28 289 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 DMRTB1Q96MA1 342 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 C19orf24Q9BVV8 132 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 COMMD4Q9H0A8 199 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 ELL3Q9HB65 397 aaPredicted RBP13.76□□□□□ -0.21
VRK2-204ENST00000428021 ESM1Q9NQ30 184 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 BABAM2Q9NXR7 383 aa13.76□□□□□ -0.21
VRK2-204ENST00000428021 CNOT2Q9NZN8 540 aaKnown RBP13.76□□□□□ -0.21
VRK2-204ENST00000428021 EFCAB10A6NFE3 127 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 KNG1P01042 644 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 RPSAP08865 295 aaKnown RBP13.75□□□□□ -0.21
VRK2-204ENST00000428021 NDUFB7P17568 137 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 MYL12AP19105 171 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 ATP1B3P54709 279 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 MTCP1P56278 107 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 METTL11BQ5VVY1 283 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 LHFPL2Q6ZUX7 228 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 PARP16Q8N5Y8 322 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 SIGLECL1Q8N7X8 197 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 ZDHHC22Q8N966 263 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 BPIFB6Q8NFQ5 453 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 OR13C9Q8NGT0 318 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 SPATA3Q8NHX4 192 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 GATAD2BQ8WXI9 593 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 H1FXQ92522 213 aaKnown RBP13.75□□□□□ -0.21
VRK2-204ENST00000428021 SPSB1Q96BD6 273 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 CEP19Q96LK0 163 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 OPALINQ96PE5 141 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 ZCCHC4Q9H5U6 513 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 FKBP14Q9NWM8 211 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 KPTNQ9Y664 436 aa13.75□□□□□ -0.21
VRK2-204ENST00000428021 CENPVL3A0A0U1RRI6 287 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 INMTO95050 263 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 ALX3O95076 343 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 C21orf33P30042 268 aaPredicted RBP13.74□□□□□ -0.21
VRK2-204ENST00000428021 NPBWR2P48146 333 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 DOC2BQ14184 412 aa13.74□□□□□ -0.21
VRK2-204ENST00000428021 ASPHD2Q6ICH7 369 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms