RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 EMG1Q92979 244 aaKnown RBP12.7□□□□□ -0.38
VARS2-203ENST00000428017 C12orf43Q96C57 262 aaKnown RBP12.7□□□□□ -0.38
VARS2-203ENST00000428017 TMEM246Q9BRR3 403 aa12.7□□□□□ -0.38
VARS2-203ENST00000428017 WDR13Q9H1Z4 485 aa12.7□□□□□ -0.38
VARS2-203ENST00000428017 OR51E2Q9H255 320 aa12.7□□□□□ -0.38
VARS2-203ENST00000428017 PPIL3Q9H2H8 161 aaKnown RBP12.7□□□□□ -0.38
VARS2-203ENST00000428017 TMEM165Q9HC07 324 aa12.7□□□□□ -0.38
VARS2-203ENST00000428017 MTCH1Q9NZJ7 389 aa12.7□□□□□ -0.38
VARS2-203ENST00000428017 NLKQ9UBE8 527 aa12.7□□□□□ -0.38
VARS2-203ENST00000428017 TRAV1-2A0A0B4J238 106 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 NKX6-3A6NJ46 265 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 AIREO43918 545 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 RPS2P15880 293 aaKnown RBP12.69□□□□□ -0.38
VARS2-203ENST00000428017 PTGFRP43088 359 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 OR3A4PP47883 348 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 PSMD7P51665 324 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 ZP1P60852 638 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 HOXA4Q00056 320 aaPredicted RBP12.69□□□□□ -0.38
VARS2-203ENST00000428017 RSU1Q15404 277 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 TEX36Q5VZQ5 186 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 AWAT2Q6E213 333 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 RNF144BQ7Z419 303 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 GPR141Q7Z602 305 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 LRRTM1Q86UE6 522 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 FAM90A1Q86YD7 464 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 PXT1Q8NFP0 134 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 OR13F1Q8NGS4 319 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 CLDND2Q8NHS1 167 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 KCTD7Q96MP8 289 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 UQCC2Q9BRT2 126 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 METTL9Q9H1A3 318 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 RHOFQ9HBH0 211 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 PCDHB16Q9NRJ7 776 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 TXNL4BQ9NX01 149 aaKnown RBP12.69□□□□□ -0.38
VARS2-203ENST00000428017 MIOXQ9UGB7 285 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 ING4Q9UNL4 249 aa12.69□□□□□ -0.38
VARS2-203ENST00000428017 MRPS28Q9Y2Q9 187 aaKnown RBP12.69□□□□□ -0.38
VARS2-203ENST00000428017 OR2AT4A6NND4 320 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 CEACAM18A8MTB9 384 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.68□□□□□ -0.38
VARS2-203ENST00000428017 KDM4BO94953 1096 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 GYPAP02724 150 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 CSTBP04080 98 aaKnown RBP12.68□□□□□ -0.38
VARS2-203ENST00000428017 ADRA2CP18825 462 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 BCL3P20749 454 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 RANBP1P43487 201 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 BMXP51813 675 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 ACP7Q6ZNF0 438 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 GDPGP1Q6ZNW5 385 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 SLC36A1Q7Z2H8 476 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 FAM58AQ8N1B3 248 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 MAPK1IP1LQ8NDC0 245 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 OR5T2Q8NGG2 359 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 OR8B3Q8NGG8 313 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 YIPF6Q96EC8 236 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 SEH1LQ96EE3 360 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 OR8B2Q96RD0 313 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 NKX3-1Q99801 234 aaPredicted RBP12.68□□□□□ -0.38
VARS2-203ENST00000428017 ZNF665Q9H7R5 613 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 CNTD2Q9H8S5 307 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 PLGRKTQ9HBL7 147 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 GLS2Q9UI32 602 aa12.68□□□□□ -0.38
VARS2-203ENST00000428017 AK6Q9Y3D8 172 aaKnown RBP12.68□□□□□ -0.38
VARS2-203ENST00000428017 PRRC2AP48634 2157 aaKnown RBP12.68□□□□□ -0.38
VARS2-203ENST00000428017 TMPRSS2O15393 492 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 ADAM20O43506 726 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 ZNF780AO75290 641 aaPredicted RBP12.67□□□□□ -0.38
VARS2-203ENST00000428017 KNG1P01042 644 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 TFAP2AP05549 437 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 CD99P14209 185 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 PRKACAP17612 351 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 CPT2P23786 658 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 RPL5P46777 297 aaKnown RBP12.67□□□□□ -0.38
VARS2-203ENST00000428017 GABRA2P47869 451 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 NPBWR2P48146 333 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 MTNR1BP49286 362 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 ERVK11-1P61568 191 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 GPR176Q14439 515 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 CIARTQ8N365 385 aaPredicted RBP12.67□□□□□ -0.38
VARS2-203ENST00000428017 NEIL1Q96FI4 390 aaPredicted RBP12.67□□□□□ -0.38
VARS2-203ENST00000428017 C18orf12Q96KH6 178 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 COX4I2Q96KJ9 171 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 FUNDC2Q9BWH2 189 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 PATZ1Q9HBE1 687 aaKnown RBP12.67□□□□□ -0.38
VARS2-203ENST00000428017 HES4Q9HCC6 221 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 RBFOX1Q9NWB1 397 aaKnown RBP12.67□□□□□ -0.38
VARS2-203ENST00000428017 OR14J1Q9UGF5 321 aa12.67□□□□□ -0.38
VARS2-203ENST00000428017 A0A096LNT2 108 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 IGKV1-12A0A0C4DH73 117 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 CDRT1O95170 752 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 HTR3BO95264 441 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 IGKV1D-12P01611 117 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 IGHV2-5P01817 119 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 SFTPBP07988 381 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 RAB3BP20337 219 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 HTR2CP28335 458 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 ALDH3B2P48448 385 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 GZMKP49863 264 aa12.66□□□□□ -0.38
VARS2-203ENST00000428017 SNU13P55769 128 aaKnown RBP12.66□□□□□ -0.38
VARS2-203ENST00000428017 ESCO2Q56NI9 601 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms