RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 A0A1B0GUS0 222 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 ENTPD6O75354 484 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 INMTO95050 263 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 PAHP00439 452 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 UBE2E1P51965 193 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 RPL15P61313 204 aaKnown RBP15.04■□□□□ -0
PSPC1-202ENST00000427943 ISL1P61371 349 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 TMED1Q13445 227 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 UBE2V2Q15819 145 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 HCP5Q6MZN7 132 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 C17orf107Q6ZR85 190 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 OR4M1Q8NGD0 313 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 HES4Q9HCC6 221 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 SLC7A11Q9UPY5 501 aa15.04■□□□□ -0
PSPC1-202ENST00000427943 TRRAPQ9Y4A5 3859 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 IGKV1-27A0A075B6S5 117 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 CLPSL1A2RUU4 121 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 BTBD17A6NE02 478 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 ANGPTL7O43827 346 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 ERVK11-1P61568 191 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 RPL31P62899 125 aaKnown RBP15.03■□□□□ -0
PSPC1-202ENST00000427943 IL24Q13007 206 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 CCDC121Q6ZUS5 278 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 MKXQ8IYA7 352 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 RDH10Q8IZV5 341 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 C17orf50Q8WW18 174 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 SLAMF9Q96A28 289 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 RNF166Q96A37 237 aaPredicted RBP15.03■□□□□ -0
PSPC1-202ENST00000427943 RNFT2Q96EX2 444 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 HRASLS5Q96KN8 279 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 PKIBQ9C010 78 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 CHST5Q9GZS9 411 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 USE1Q9NZ43 259 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 AASSQ9UDR5 926 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 VPREB3Q9UKI3 123 aa15.03■□□□□ -0
PSPC1-202ENST00000427943 F8VVB4 439 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 F8VWA3 439 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 GATBO75879 557 aaKnown RBP15.02■□□□□ -0
PSPC1-202ENST00000427943 UBCP0CG48 685 aaKnown RBP15.02■□□□□ -0
PSPC1-202ENST00000427943 PIPP12273 146 aaPredicted RBP15.02■□□□□ -0
PSPC1-202ENST00000427943 CCL3L1P16619 93 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 ALDH3A2P51648 485 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 ACSM1Q08AH1 577 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 ZNF273Q14593 569 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 TMEM200BQ69YZ2 307 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 ZFP1Q6P2D0 407 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 BRICD5Q6PL45 260 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 CBR4Q8N4T8 237 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 ASCC1Q8N9N2 400 aaKnown RBP15.02■□□□□ -0
PSPC1-202ENST00000427943 OR5D13Q8NGL4 314 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 RNF114Q9Y508 228 aa15.02■□□□□ -0
PSPC1-202ENST00000427943 MEX3AA1L020 520 aaKnown RBP15.01□□□□□ -0.01
PSPC1-202ENST00000427943 TK1P04183 234 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 FUT6P51993 359 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 ERVFRD-1P60508 538 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 ACTC1P68032 377 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 ACTA1P68133 377 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 COL10A1Q03692 680 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 DHRS7BQ6IAN0 325 aaPredicted RBP15.01□□□□□ -0.01
PSPC1-202ENST00000427943 GDPGP1Q6ZNW5 385 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 SLC25A26Q70HW3 274 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 OR2G2Q8NGZ5 317 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 LINC01006Q8NI28 216 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 TRUB1Q8WWH5 349 aaKnown RBP15.01□□□□□ -0.01
PSPC1-202ENST00000427943 BORCS8Q96FH0 119 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 CEP19Q96LK0 163 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 MBOAT4Q96T53 435 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 MTCH1Q9NZJ7 389 aa15.01□□□□□ -0.01
PSPC1-202ENST00000427943 SF3B6Q9Y3B4 125 aaKnown RBP15.01□□□□□ -0.01
PSPC1-202ENST00000427943 MEGF8Q7Z7M0 2845 aa15□□□□□ -0.01
PSPC1-202ENST00000427943 DAPL1A0PJW8 107 aa15□□□□□ -0.01
PSPC1-202ENST00000427943 E9PQ18 207 aa15□□□□□ -0.01
PSPC1-202ENST00000427943 PAX6P26367 422 aa15□□□□□ -0.01
PSPC1-202ENST00000427943 BMXP51813 675 aa15□□□□□ -0.01
PSPC1-202ENST00000427943 OR12D2P58182 307 aa15□□□□□ -0.01
PSPC1-202ENST00000427943 KRTAP10-3P60369 221 aa15□□□□□ -0.01
PSPC1-202ENST00000427943 SNRPGP62308 76 aaKnown RBP15□□□□□ -0.01
PSPC1-202ENST00000427943 CNN3Q15417 329 aaKnown RBP15□□□□□ -0.01
PSPC1-202ENST00000427943 TREML4Q6UXN2 200 aa15□□□□□ -0.01
PSPC1-202ENST00000427943 Q6ZSV7 163 aa15□□□□□ -0.01
PSPC1-202ENST00000427943 CCDC54Q8NEL0 328 aa15□□□□□ -0.01
PSPC1-202ENST00000427943 ADAT3Q96EY9 351 aaPredicted RBP15□□□□□ -0.01
PSPC1-202ENST00000427943 A0A1W2PPH5 198 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 H3BUX3 64 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 J3QRE1 110 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 SLC16A6O15403 523 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 SERPINA3P01011 423 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 COX7A1P24310 79 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 POU3F4P49335 361 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 NANOS3P60323 173 aaKnown RBP14.99□□□□□ -0.01
PSPC1-202ENST00000427943 OCLNQ16625 522 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 MIDNQ504T8 468 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 ZNF782Q6ZMW2 699 aaPredicted RBP14.99□□□□□ -0.01
PSPC1-202ENST00000427943 C11orf42Q8N5U0 333 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 ZSCAN4Q8NAM6 433 aaPredicted RBP14.99□□□□□ -0.01
PSPC1-202ENST00000427943 BEND2Q8NDZ0 799 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 PP6455Q8WZ26 134 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 EMG1Q92979 244 aaKnown RBP14.99□□□□□ -0.01
PSPC1-202ENST00000427943 CITED1Q99966 193 aa14.99□□□□□ -0.01
PSPC1-202ENST00000427943 FAM234AQ9H0X4 552 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms