RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 RAG2P55895 527 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 CLDN8P56748 225 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 OR4D2P58180 307 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 PRPS1P60891 318 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 RPL32P62910 135 aaKnown RBP2.32□□□□□ -2.04
LINC01040-201ENST00000425048 MXD1Q05195 221 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ELP6Q0PNE2 266 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 TWF1Q12792 350 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 RAB35Q15286 201 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 USF2Q15853 346 aaPredicted RBP2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF674Q2M3X9 581 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 SCGB2B2Q4G0G5 96 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 AGKQ53H12 422 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 PYDC2Q56P42 97 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 MESTQ5EB52 335 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 COQ5Q5HYK3 327 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 BCL2L15Q5TBC7 163 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM244Q5VVB8 128 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 MFSD14CQ5VZR4 134 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 TRIQKQ629K1 86 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 CLEC6AQ6EIG7 209 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 H3F3CQ6NXT2 135 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 C1orf94Q6P1W5 598 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM91Q6ZNR0 172 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 C1orf186Q6ZWK4 172 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ARMCX2Q7L311 632 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 TMCO2Q7Z6W1 182 aaPredicted RBP2.32□□□□□ -2.04
LINC01040-201ENST00000425048 LINC01551Q86U37 167 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 CYP4Z1Q86W10 505 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 UNC93AQ86WB7 457 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 TRIM69Q86WT6 500 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 WDFY1Q8IWB7 410 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF100Q8IYN0 542 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 SPICQ8N5J4 248 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF283Q8N7M2 679 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 CLDN22Q8N7P3 220 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 UBAC2Q8NBM4 344 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 MFSD9Q8NBP5 474 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ATP6V1C2Q8NEY4 427 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 OR10AD1Q8NGE0 317 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 OR2D3Q8NGH3 330 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 OR9I1Q8NGQ6 314 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 OR2T35Q8NGX2 323 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 OR6K3Q8NGY3 331 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 NEIL3Q8TAT5 605 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF675Q8TD23 568 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 PAQR8Q8TEZ7 354 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 UBTD2Q8WUN7 234 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 SDR42E1Q8WUS8 393 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ACOT11Q8WXI4 607 aaPredicted RBP2.32□□□□□ -2.04
LINC01040-201ENST00000425048 MR1Q95460 341 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ISG20Q96AZ6 181 aaKnown RBP2.32□□□□□ -2.04
LINC01040-201ENST00000425048 DIRAS2Q96HU8 199 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ITCHQ96J02 903 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM56Q96MV1 263 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 YPEL4Q96NS1 127 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF382Q96SR6 550 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 PRRT1Q99946 306 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 SEC11CQ9BY50 192 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 MRPL13Q9BYD1 178 aaKnown RBP2.32□□□□□ -2.04
LINC01040-201ENST00000425048 PLA2G12AQ9BZM1 189 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 PCBD2Q9H0N5 130 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 POLR3FQ9H1D9 316 aaPredicted RBP2.32□□□□□ -2.04
LINC01040-201ENST00000425048 TLNRD1Q9H1K6 362 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 SLC38A1Q9H2H9 487 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 MEAF6Q9HAF1 191 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 LPAR2Q9HBW0 351 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ADAP2Q9NPF8 381 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 TUBG2Q9NRH3 451 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 SMCO4Q9NRQ5 59 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF629Q9UEG4 869 aaPredicted RBP2.32□□□□□ -2.04
LINC01040-201ENST00000425048 SMPXQ9UHP9 88 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 C3orf18Q9UK00 162 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 ADAM28Q9UKQ2 775 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 HES2Q9Y543 173 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 MTCH2Q9Y6C9 303 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM56-RWDD3S4R434 201 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 PATJQ8NI35 1801 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 KIAA1671Q9BY89 1806 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 PTPRJQ12913 1337 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 PLXNA3P51805 1871 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 NUP210LQ5VU65 1888 aa2.32□□□□□ -2.04
LINC01040-201ENST00000425048 LY75O60449 1722 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 MGAMO43451 1857 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 PLXNA1Q9UIW2 1896 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 IGLV4-69A0A075B6H9 119 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 A0A096LPI6 279 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 A0A1B0GW55 424 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 A0A1W2PQL4 384 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF726A6NNF4 738 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 FAM166BA8MTA8 275 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 C5orf58C9J3I9 102 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 C9J4A7 227 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 NPIPA2E9PIF3 369 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF593O00488 134 aaPredicted RBP2.31□□□□□ -2.04
LINC01040-201ENST00000425048 UBDO15205 165 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 FGF16O43320 207 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 RNF13O43567 381 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 LANCL1O43813 399 aa2.31□□□□□ -2.04
LINC01040-201ENST00000425048 GGCTO75223 188 aaKnown RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms