RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 RPUSD1Q9UJJ7 312 aaKnown RBP10.66□□□□□ -0.7
VRK3-203ENST00000424804 SLC7A11Q9UPY5 501 aa10.66□□□□□ -0.7
VRK3-203ENST00000424804 NKX6-3A6NJ46 265 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 NDUFB3O43676 98 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 SYNGR1O43759 233 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 GPR137BO60478 399 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 WBP4O75554 376 aaKnown RBP10.65□□□□□ -0.7
VRK3-203ENST00000424804 CLPXO76031 633 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 TGM4P49221 684 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 NANOS3P60323 173 aaKnown RBP10.65□□□□□ -0.7
VRK3-203ENST00000424804 GALEQ14376 348 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 PDCD1Q15116 288 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 C11orf91Q3C1V1 193 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 OGFRL1Q5TC84 451 aaPredicted RBP10.65□□□□□ -0.7
VRK3-203ENST00000424804 TMEM244Q5VVB8 128 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 SLC36A1Q7Z2H8 476 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 ZNF573Q86YE8 665 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 Q8N7P7 452 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 GATAD2BQ8WXI9 593 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 AQP3Q92482 292 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 H1FXQ92522 213 aaKnown RBP10.65□□□□□ -0.7
VRK3-203ENST00000424804 PELI1Q96FA3 418 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 DCLRE1BQ9H816 532 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 CNTD2Q9H8S5 307 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 NLKQ9UBE8 527 aa10.65□□□□□ -0.7
VRK3-203ENST00000424804 NKX1-2Q9UD57 310 aaPredicted RBP10.65□□□□□ -0.7
VRK3-203ENST00000424804 H0YHG0 523 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 GATBO75879 557 aaKnown RBP10.64□□□□□ -0.71
VRK3-203ENST00000424804 SERPINA3P01011 423 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 SELLP14151 372 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 NDUFB7P17568 137 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 CCL1P22362 96 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 CAPZA1P52907 286 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 GBX2P52951 348 aaPredicted RBP10.64□□□□□ -0.71
VRK3-203ENST00000424804 DLX1P56177 255 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 ISL1P61371 349 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 ALKBH1Q13686 389 aaKnown RBP10.64□□□□□ -0.71
VRK3-203ENST00000424804 TAF9Q16594 264 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 MIDNQ504T8 468 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 ATPAF1Q5TC12 328 aaPredicted RBP10.64□□□□□ -0.71
VRK3-203ENST00000424804 ANGPTL5Q86XS5 388 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 C8orf59Q8N0T1 100 aaPredicted RBP10.64□□□□□ -0.71
VRK3-203ENST00000424804 PNLDC1Q8NA58 520 aaKnown RBP10.64□□□□□ -0.71
VRK3-203ENST00000424804 ZSCAN4Q8NAM6 433 aaPredicted RBP10.64□□□□□ -0.71
VRK3-203ENST00000424804 OR13C3Q8NGS6 347 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 SSMEM1Q8WWF3 244 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 DYRK2Q92630 601 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 TNFRSF14Q92956 283 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 ITFG2Q969R8 447 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 FGGYQ96C11 551 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 BORCS8Q96FH0 119 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 OR14J1Q9UGF5 321 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 KPTNQ9Y664 436 aa10.64□□□□□ -0.71
VRK3-203ENST00000424804 PQLC2LA1A4F0 135 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 OR2AT4A6NND4 320 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 DHRS7CA6NNS2 312 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 E9PI62 339 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 RNASEK-C17orf49H0YIS7 233 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 J3QT63 122 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 CASQ2O14958 399 aaPredicted RBP10.63□□□□□ -0.71
VRK3-203ENST00000424804 NXPH2O95156 264 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 ECDO95905 644 aaPredicted RBP10.63□□□□□ -0.71
VRK3-203ENST00000424804 IGHA1P01876 353 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 CAPGP40121 348 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 RPL15P61313 204 aaKnown RBP10.63□□□□□ -0.71
VRK3-203ENST00000424804 ADARB1P78563 741 aaKnown RBP10.63□□□□□ -0.71
VRK3-203ENST00000424804 PRB3Q04118 309 aaPredicted RBP10.63□□□□□ -0.71
VRK3-203ENST00000424804 SLC34A1Q06495 639 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 CNN3Q15417 329 aaKnown RBP10.63□□□□□ -0.71
VRK3-203ENST00000424804 UBE2V2Q15819 145 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 LRRC10Q5BKY1 277 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 FAM76BQ5HYJ3 339 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 METTL11BQ5VVY1 283 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 TMEM42Q69YG0 159 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 STUMQ69YW2 141 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 METAP1DQ6UB28 335 aaPredicted RBP10.63□□□□□ -0.71
VRK3-203ENST00000424804 Q6ZSV7 163 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 VMO1Q7Z5L0 202 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 PDZD9Q8IXQ8 264 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 CCDC54Q8NEL0 328 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 TMEM185AQ8NFB2 350 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 OR51A4Q8NGJ6 313 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 OR10AC1Q8NH08 325 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 TSEN15Q8WW01 171 aaKnown RBP10.63□□□□□ -0.71
VRK3-203ENST00000424804 RNF166Q96A37 237 aaPredicted RBP10.63□□□□□ -0.71
VRK3-203ENST00000424804 ADAT3Q96EY9 351 aaPredicted RBP10.63□□□□□ -0.71
VRK3-203ENST00000424804 COMMD4Q9H0A8 199 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 INPP5EQ9NRR6 644 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 ONECUT1Q9UBC0 465 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 HHLA2Q9UM44 414 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 POLDIP2Q9Y2S7 368 aa10.63□□□□□ -0.71
VRK3-203ENST00000424804 TRBV2A0A0J9YWF9 115 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 IRGMA1A4Y4 181 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 MEGF11A6BM72 1044 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 CRYBA1P05813 215 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 GNAO1P09471 354 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 MYL12AP19105 171 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 POU3F4P49335 361 aa10.62□□□□□ -0.71
VRK3-203ENST00000424804 CEBPDP49716 269 aaPredicted RBP10.62□□□□□ -0.71
VRK3-203ENST00000424804 ETV1P50549 477 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms