RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SDSLQ96GA7 329 aa18.05■□□□□ 0.48
TRAF4-204ENST00000422344 NRIP2Q9BQI9 281 aa18.05■□□□□ 0.48
TRAF4-204ENST00000422344 INPP5EQ9NRR6 644 aa18.05■□□□□ 0.48
TRAF4-204ENST00000422344 CLDN34H7C241 214 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 ISG15P05161 165 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 OCM2P0CE71 109 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 OCMP0CE72 109 aaPredicted RBP18.04■□□□□ 0.48
TRAF4-204ENST00000422344 NANOS3P60323 173 aaKnown RBP18.04■□□□□ 0.48
TRAF4-204ENST00000422344 BLMHQ13867 455 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 SLC9A3R2Q15599 337 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 KLHL22Q53GT1 634 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 PDZD9Q8IXQ8 264 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 BATF2Q8N1L9 274 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 SYS1Q8N2H4 156 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 ZNF676Q8N7Q3 588 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 RNF166Q96A37 237 aaPredicted RBP18.04■□□□□ 0.48
TRAF4-204ENST00000422344 ELL3Q9HB65 397 aaPredicted RBP18.04■□□□□ 0.48
TRAF4-204ENST00000422344 NOX4Q9NPH5 578 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 C8orf4Q9NR00 106 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 OR14J1Q9UGF5 321 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 HHLA2Q9UM44 414 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 MYRFQ9Y2G1 1151 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 MAB21L2Q9Y586 359 aa18.04■□□□□ 0.48
TRAF4-204ENST00000422344 RNASE1P07998 156 aaKnown RBP18.03■□□□□ 0.48
TRAF4-204ENST00000422344 PRDX2P32119 198 aa18.03■□□□□ 0.48
TRAF4-204ENST00000422344 RCN1Q15293 331 aa18.03■□□□□ 0.48
TRAF4-204ENST00000422344 ZNF561Q8N587 486 aa18.03■□□□□ 0.48
TRAF4-204ENST00000422344 FGGYQ96C11 551 aa18.03■□□□□ 0.48
TRAF4-204ENST00000422344 C1orf147Q96MC9 270 aaPredicted RBP18.03■□□□□ 0.48
TRAF4-204ENST00000422344 SIRT7Q9NRC8 400 aa18.03■□□□□ 0.48
TRAF4-204ENST00000422344 TRBV23-1A0A0A0MS06 115 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 HOXA3O43365 443 aaPredicted RBP18.02■□□□□ 0.48
TRAF4-204ENST00000422344 CYB5AP00167 134 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 IGHA1P01876 353 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 ATP1B3P54709 279 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 MRPL28Q13084 256 aaKnown RBP18.02■□□□□ 0.48
TRAF4-204ENST00000422344 ALKBH1Q13686 389 aaKnown RBP18.02■□□□□ 0.48
TRAF4-204ENST00000422344 AWAT1Q58HT5 328 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 EGFL6Q8IUX8 553 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 FAM185AQ8N0U4 392 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 CD177Q8N6Q3 437 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 PACRGLQ8N7B6 248 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 OR52I1Q8NGK6 324 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 OR13C3Q8NGS6 347 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 APH1BQ8WW43 257 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 CYGBQ8WWM9 190 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 ADAT3Q96EY9 351 aaPredicted RBP18.02■□□□□ 0.48
TRAF4-204ENST00000422344 CEP19Q96LK0 163 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 ERVK13-1Q9NX77 482 aa18.02■□□□□ 0.48
TRAF4-204ENST00000422344 KNG1P01042 644 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 RPSAP08865 295 aaKnown RBP18.01■□□□□ 0.47
TRAF4-204ENST00000422344 PRKACBP22694 351 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 EEF1B2P24534 225 aaKnown RBP18.01■□□□□ 0.47
TRAF4-204ENST00000422344 CEBPDP49716 269 aaPredicted RBP18.01■□□□□ 0.47
TRAF4-204ENST00000422344 RBP2P50120 134 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 GBX2P52951 348 aaPredicted RBP18.01■□□□□ 0.47
TRAF4-204ENST00000422344 GUCA2AQ02747 115 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 TTC23Q5W5X9 447 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 LPCAT4Q643R3 524 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 SLC25A26Q70HW3 274 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 DNAAF1Q8NEP3 725 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 SLAMF9Q96A28 289 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 PRDM13Q9H4Q3 707 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 ISG20L2Q9H9L3 353 aaKnown RBP18.01■□□□□ 0.47
TRAF4-204ENST00000422344 HES4Q9HCC6 221 aa18.01■□□□□ 0.47
TRAF4-204ENST00000422344 MRPS18AQ9NVS2 196 aaKnown RBP18.01■□□□□ 0.47
TRAF4-204ENST00000422344 IGKV1-27A0A075B6S5 117 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 OR4C45A6NMZ5 311 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 M0R1W7 72 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 INMTO95050 263 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 CCDC159P0C7I6 412 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 HKR1P10072 659 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 ATF1P18846 271 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 ERVK11-1P61568 191 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 FOXL1Q12952 345 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 Q6YL49 198 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 UTS2BQ765I0 119 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 SETD9Q8NE22 299 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 HAVCR2Q8TDQ0 301 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 COMMD4Q9H0A8 199 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 METTL8Q9H825 291 aaKnown RBP18■□□□□ 0.47
TRAF4-204ENST00000422344 NEK6Q9HC98 313 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 TNFRSF19Q9NS68 423 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 CAB39Q9Y376 341 aaPredicted RBP18■□□□□ 0.47
TRAF4-204ENST00000422344 FAM96BQ9Y3D0 163 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 TRRAPQ9Y4A5 3859 aa18■□□□□ 0.47
TRAF4-204ENST00000422344 A0A1W2PPH5 198 aa17.99■□□□□ 0.47
TRAF4-204ENST00000422344 IRGMA1A4Y4 181 aa17.99■□□□□ 0.47
TRAF4-204ENST00000422344 H0YAE9 185 aa17.99■□□□□ 0.47
TRAF4-204ENST00000422344 AZGP1P25311 298 aaKnown RBP17.99■□□□□ 0.47
TRAF4-204ENST00000422344 PEX2P28328 305 aa17.99■□□□□ 0.47
TRAF4-204ENST00000422344 POU3F4P49335 361 aa17.99■□□□□ 0.47
TRAF4-204ENST00000422344 MTCP1P56278 107 aa17.99■□□□□ 0.47
TRAF4-204ENST00000422344 ZNF691Q5VV52 312 aa17.99■□□□□ 0.47
TRAF4-204ENST00000422344 NCR3LG1Q68D85 454 aa17.99■□□□□ 0.47
TRAF4-204ENST00000422344 METAP1DQ6UB28 335 aaPredicted RBP17.99■□□□□ 0.47
TRAF4-204ENST00000422344 FIP1L1Q6UN15 594 aaKnown RBP17.99■□□□□ 0.47
TRAF4-204ENST00000422344 C1orf122Q6ZSJ8 110 aa17.99■□□□□ 0.47
TRAF4-204ENST00000422344 LHFPL2Q6ZUX7 228 aa17.99■□□□□ 0.47
TRAF4-204ENST00000422344 MKXQ8IYA7 352 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms