RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 IGKV3-15P01624 115 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 PDGFAP04085 211 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 IFNA6P05013 189 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 SFTPBP07988 381 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 CCL2P13500 99 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 CBR1P16152 277 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 FPR2P25090 351 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 SNU13P55769 128 aaKnown RBP7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 IKZF1Q13422 519 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 ARFRP1Q13795 201 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 HLXQ14774 488 aaPredicted RBP7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 SURF2Q15527 256 aaPredicted RBP7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 NKPD1Q17RQ9 610 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 LY6G6FQ5SQ64 297 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 OVCH2Q7RTZ1 564 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 C6orf201Q7Z4U5 140 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 LYG2Q86SG7 212 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 CD163Q86VB7 1156 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 CALHM1Q8IU99 346 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 GCNT2Q8N0V5 402 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 C12orf45Q8N5I9 185 aaPredicted RBP7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 ZNF611Q8N823 705 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 FAM169BQ8N8A8 192 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 TMEM185AQ8NFB2 350 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 OR5H2Q8NGV7 314 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 OR2T35Q8NGX2 323 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 OR5P3Q8WZ94 311 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 CYYR1Q96J86 154 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 PAPOLGQ9BWT3 736 aaKnown RBP7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 ELL3Q9HB65 397 aaPredicted RBP7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 OBP2BQ9NPH6 170 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 DECR2Q9NUI1 292 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 RCC2Q9P258 522 aaKnown RBP7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 MGAT4AQ9UM21 535 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 GPR132Q9UNW8 380 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 LHX6Q9UPM6 363 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 WASF3Q9UPY6 502 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 NOP16Q9Y3C1 178 aaKnown RBP7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 AKAP13Q12802 2813 aa7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 CHD3Q12873 2000 aaKnown RBP7.78□□□□□ -1.16
LINCMD1-201ENST00000418518 A0A0B4J2A0 478 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 HMSDA8MTL9 139 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 KLK10O43240 276 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 WDR1O75083 606 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 IGLV1-44P01699 117 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 CD8AP01732 235 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 CRYABP02511 175 aaKnown RBP7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 PMP2P02689 132 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 TPOP07202 933 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 GSTT2P0CG29 244 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 PPP3CBP16298 524 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 TUBG1P23258 451 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 GABRR1P24046 479 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 ECI1P42126 302 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 H2BFSP57053 126 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 UBE2NP61088 152 aaKnown RBP7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 FGF12P61328 243 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 MRPL49Q13405 166 aaKnown RBP7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 GRK1Q15835 563 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 TAF9Q16594 264 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 SRSF7Q16629 238 aaKnown RBP eCLIP7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 C2orf68Q2NKX9 166 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 SCGB2B2Q4G0G5 96 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 C4orf46Q504U0 113 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 C1QTNF12Q5T7M4 302 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 VWA1Q6PCB0 445 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 Q6ZS49 121 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 SEM1Q6ZVN7 128 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 LINC00596Q86U02 117 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 MYPOPQ86VE0 399 aaPredicted RBP7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 TMEM17Q86X19 198 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 MKXQ8IYA7 352 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 FBXL14Q8N1E6 418 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 WDR31Q8NA23 367 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 UXS1Q8NBZ7 420 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 OR10AD1Q8NGE0 317 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 OR5AP2Q8NGF4 316 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 OR5M9Q8NGP3 310 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 OR5M8Q8NGP6 311 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 OR13G1Q8NGZ3 307 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 OR51F2Q8NH61 342 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 GRPEL2Q8TAA5 225 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 MITD1Q8WV92 249 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 SCGB3A2Q96PL1 93 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 DHRS9Q9BPW9 319 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 SLX1AQ9BQ83 275 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 SULT4A1Q9BR01 284 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 PKIBQ9C010 78 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 PPA2Q9H2U2 334 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 RHOFQ9HBH0 211 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 TUBG2Q9NRH3 451 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 PLEKHJ1Q9NW61 149 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 SHPKQ9UHJ6 478 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 AK3Q9UIJ7 227 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 HSPB11Q9Y547 144 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 ANKRD11Q6UB99 2663 aaPredicted RBP7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 PTPRQQ9UMZ3 2332 aa7.77□□□□□ -1.17
LINCMD1-201ENST00000418518 ZGRF1Q86YA3 2104 aa7.76□□□□□ -1.17
LINCMD1-201ENST00000418518 PLSCR5A0PG75 271 aa7.76□□□□□ -1.17
LINCMD1-201ENST00000418518 C9orf170A2RU37 121 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms