RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	SLC36A1	Q7Z2H8	476 aa		13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	PNLDC1	Q8NA58	520 aa	Known RBP	13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	OR13C3	Q8NGS6	347 aa		13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	FAM216A	Q8WUB2	273 aa		13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	ADAT3	Q96EY9	351 aa	Predicted RBP	13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	MS4A7	Q9GZW8	240 aa	Predicted RBP	13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	DNTTIP1	Q9H147	329 aa		13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	PLEKHA1	Q9HB21	404 aa		13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	SMURF1	Q9HCE7	757 aa		13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	ARHGAP32	A7KAX9	2087 aa		13.58	□□□□□ -0.24
DDR1-231	ENST00000417521	DHRS7C	A6NNS2	312 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	ZNF732	B4DXR9	585 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	GPR37	O15354	613 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	PLAT	P00750	562 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	IGHV4-38-2	P0DP08	117 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	FGF12	P61328	243 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	CEP78	Q5JTW2	689 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	ZNF367	Q7RTV3	350 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	ZDHHC22	Q8N966	263 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	CCDC54	Q8NEL0	328 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	TSEN15	Q8WW01	171 aa	Known RBP	13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	FGGY	Q96C11	551 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	OPALIN	Q96PE5	141 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	CCL13	Q99616	98 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	MGLL	Q99685	303 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	OR51I2	Q9H344	312 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	ZNF696	Q9H7X3	374 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	ZNF281	Q9Y2X9	895 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	ANK2	Q01484	3957 aa		13.57	□□□□□ -0.24
DDR1-231	ENST00000417521	ZNF879	B4DU55	563 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	AKR7A2	O43488	359 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	NRAS	P01111	189 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	SOX2	P48431	317 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	BPIFB3	P59826	476 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	RPS11	P62280	158 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	MLLT11	Q13015	90 aa	Predicted RBP	13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	LIPK	Q5VXJ0	399 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	TMEM42	Q69YG0	159 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	STUM	Q69YW2	141 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	MOB3C	Q70IA8	216 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	BTN2A1	Q7KYR7	527 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	BCL6B	Q8N143	479 aa	Predicted RBP	13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	SIGLECL1	Q8N7X8	197 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	TSPAN14	Q8NG11	270 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	ZNF671	Q8TAW3	534 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	SEH1L	Q96EE3	360 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	DMRTB1	Q96MA1	342 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	ESM1	Q9NQ30	184 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	GPR173	Q9NS66	373 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	DNAJB11	Q9UBS4	358 aa		13.56	□□□□□ -0.24
DDR1-231	ENST00000417521	FCN3	O75636	299 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	ZNF20	P17024	532 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	AMY2B	P19961	511 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	CLVS2	Q5SYC1	327 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	UBE2U	Q5VVX9	321 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	PLCXD3	Q63HM9	321 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	GPR148	Q8TDV2	347 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	UFD1	Q92890	307 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	NR1H4	Q96RI1	486 aa	Predicted RBP	13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	TMED9	Q9BVK6	235 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	WDR13	Q9H1Z4	485 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	ISYNA1	Q9NPH2	558 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	DHDH	Q9UQ10	334 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	TRAV40	A0A0B4J280	105 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	ANKRD61	A6NGH8	418 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	NDUFB3	O43676	98 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	INMT	O95050	263 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	CD1A	P06126	327 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	MMP9	P14780	707 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	CPE	P16870	476 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	UBA52	P62987	128 aa	Known RBP	13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	TPBG	Q13641	420 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	UBE2V2	Q15819	145 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	NEDD8	Q15843	81 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	YIF1B	Q5BJH7	314 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	GPR157	Q5UAW9	335 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	ZNF788	Q6ZQV5	615 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	OR5T2	Q8NGG2	359 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	ANGPTL6	Q8NI99	470 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	ST8SIA4	Q92187	359 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	AQP3	Q92482	292 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	MED30	Q96HR3	178 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	WDFY2	Q96P53	400 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	CNTD2	Q9H8S5	307 aa		13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	RPUSD1	Q9UJJ7	312 aa	Known RBP	13.55	□□□□□ -0.24
DDR1-231	ENST00000417521	IGHV3OR16-10	A0A075B7F0	116 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	TRBV5-5	A0A0J9YX44	114 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	RHBDL1	O75783	438 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	TOX4	O94842	621 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	RPSA	P08865	295 aa	Known RBP	13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	OCM2	P0CE71	109 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	GLRA1	P23415	457 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	PSMB9	P28065	219 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	GMFB	P60983	142 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	ACTG1	P63261	375 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	INSL4	Q14641	139 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	SSX1	Q16384	188 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	LRRC10	Q5BKY1	277 aa		13.54	□□□□□ -0.24
DDR1-231	ENST00000417521	METTL11B	Q5VVY1	283 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms