RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 FAHD2AQ96GK7 314 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 CEP19Q96LK0 163 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 CCL13Q99616 98 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 NRIP2Q9BQI9 281 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 SHARPINQ9H0F6 387 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 SNTG1Q9NSN8 517 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 CDC42EP3Q9UKI2 254 aa19.25■□□□□ 0.67
SMARCB1-205ENST00000417137 PLATP00750 562 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 HSMCR30P0CW71 290 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 MAPK3P27361 379 aaPredicted RBP19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 POU3F4P49335 361 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 RPS11P62280 158 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 C11orf91Q3C1V1 193 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 CD276Q5ZPR3 534 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 ZNF529Q6P280 563 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 ZNF841Q6ZN19 808 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 Q8IYB0 196 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 SVOPQ8N4V2 548 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 OR13C5Q8NGS8 318 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 ZNF488Q96MN9 340 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 BEX2Q9BXY8 128 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 TAS2R4Q9NYW5 299 aa19.24■□□□□ 0.67
SMARCB1-205ENST00000417137 ZNF879B4DU55 563 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 TRAPPC2LH3BP13 241 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 J3QLI3 93 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 GABRA2P47869 451 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 PDZK1IP1Q13113 114 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 TBCEQ15813 527 aaPredicted RBP19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 FAM120AOSQ5T036 256 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 TEX29Q8N6K0 151 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 ANGPTL6Q8NI99 470 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 SLAMF9Q96A28 289 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 TMEM138Q9NPI0 162 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 MTCH1Q9NZJ7 389 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 CTSZQ9UBR2 303 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 LRRC42Q9Y546 428 aa19.23■□□□□ 0.67
SMARCB1-205ENST00000417137 ZANQ9Y493 2812 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 KIAA1324LA8MWY0 1029 aaPredicted RBP19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 NDUFB3O43676 98 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 CRLF1O75462 422 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 GPX5O75715 221 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 ALDOBP05062 364 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 PSG2P11465 335 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 MAP2K4P45985 399 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 ERVK11-1P61568 191 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 MLLT11Q13015 90 aaPredicted RBP19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 DOC2BQ14184 412 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 KISS1Q15726 138 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 CHRFAM7AQ494W8 412 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 LRRC10Q5BKY1 277 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 OR14A2Q96R54 314 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 GPER1Q99527 375 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 MGLLQ99685 303 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 HES4Q9HCC6 221 aa19.22■□□□□ 0.67
SMARCB1-205ENST00000417137 LOC105371242A0A075B767 164 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 DVL1O14640 695 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 GPR37O15354 613 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 ECDO95905 644 aaPredicted RBP19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 TGFBR2P37173 567 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 IL13RA1P78552 427 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 TPBGQ13641 420 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 FIP1L1Q6UN15 594 aaKnown RBP19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 BTNL3Q6UXE8 466 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 ZNF788Q6ZQV5 615 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 ZNF367Q7RTV3 350 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 SATL1Q86VE3 508 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 SAXO1Q8IYX7 474 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 ZSCAN4Q8NAM6 433 aaPredicted RBP19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 RAB40AQ8WXH6 277 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 RFT1Q96AA3 541 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 SPACA5Q96QH8 159 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 RHOFQ9HBH0 211 aa19.21■□□□□ 0.67
SMARCB1-205ENST00000417137 TLN2Q9Y4G6 2542 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 TRBV5-7A0A0A0MS05 114 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 RFPL4AA6NLU0 287 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 RFPL4AL1F8VTS6 287 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 INMTO95050 263 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 KNG1P01042 644 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 TMEM225BP0DP42 221 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 BDKRB2P30411 391 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 TRAM1Q15629 374 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 ACSM3Q53FZ2 586 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 LIPKQ5VXJ0 399 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 OR51A2Q8NGJ7 313 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 DERL3Q96Q80 235 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 TMED9Q9BVK6 235 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 C7orf69Q9H7B7 122 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 ACOT13Q9NPJ3 140 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 MMP26Q9NRE1 261 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 FOXJ3Q9UPW0 622 aa19.2■□□□□ 0.66
SMARCB1-205ENST00000417137 IGKV1D-17A0A075B6S4 117 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 SIGLEC5O15389 551 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 SPRY1O43609 319 aaPredicted RBP19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 CPEP16870 476 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 IGFBP3P17936 291 aaPredicted RBP19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 FSTP19883 344 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 PSMA1P25786 263 aaKnown RBP19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 PRDX2P32119 198 aa19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 EMX1Q04741 257 aaPredicted RBP19.19■□□□□ 0.66
SMARCB1-205ENST00000417137 IKZF1Q13422 519 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms