RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 RBP2P50120 134 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 GBX2P52951 348 aaPredicted RBP9.24□□□□□ -0.93
RFFL-204ENST00000414419 NANOS3P60323 173 aaKnown RBP9.24□□□□□ -0.93
RFFL-204ENST00000414419 MRPL28Q13084 256 aaKnown RBP9.24□□□□□ -0.93
RFFL-204ENST00000414419 ALKBH1Q13686 389 aaKnown RBP9.24□□□□□ -0.93
RFFL-204ENST00000414419 RCN1Q15293 331 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 DEFB112Q30KQ8 113 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 TTC23Q5W5X9 447 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 LPCAT4Q643R3 524 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 RUSC1-AS1Q66K80 236 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 PDZD9Q8IXQ8 264 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 BATF2Q8N1L9 274 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 SYS1Q8N2H4 156 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 ZNF561Q8N587 486 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 PACRGLQ8N7B6 248 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 SETD9Q8NE22 299 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 OR52I1Q8NGK6 324 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 OR13C3Q8NGS6 347 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 C8orf46Q8TAG6 207 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 HAVCR2Q8TDQ0 301 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 FGGYQ96C11 551 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 NRIP2Q9BQI9 281 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 COMMD4Q9H0A8 199 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 NEK6Q9HC98 313 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 NOX4Q9NPH5 578 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 ERVK13-1Q9NX77 482 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 ZNF222Q9UK12 451 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 CAB39Q9Y376 341 aaPredicted RBP9.24□□□□□ -0.93
RFFL-204ENST00000414419 MAB21L2Q9Y586 359 aa9.24□□□□□ -0.93
RFFL-204ENST00000414419 SOX21Q9Y651 276 aaPredicted RBP9.24□□□□□ -0.93
RFFL-204ENST00000414419 TRBV23-1A0A0A0MS06 115 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 MDFIC2A0A1B0GVS7 189 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 IRGMA1A4Y4 181 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 H0YAE9 185 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 CLDN34H7C241 214 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 KNG1P01042 644 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 IGHA1P01876 353 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 CCDC159P0C7I6 412 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 ATF1P18846 271 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 MTCP1P56278 107 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 GUCA2AQ02747 115 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 FOXL1Q12952 345 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 SLC9A3R2Q15599 337 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 TUSC1Q2TAM9 212 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 FIP1L1Q6UN15 594 aaKnown RBP9.23□□□□□ -0.93
RFFL-204ENST00000414419 SLC25A26Q70HW3 274 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 MKXQ8IYA7 352 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 FAM185AQ8N0U4 392 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 DHRSXQ8N5I4 330 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 CD177Q8N6Q3 437 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 C3orf56Q8N813 242 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 DNAAF1Q8NEP3 725 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 OR5AK2Q8NH90 309 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 ADAT3Q96EY9 351 aaPredicted RBP9.23□□□□□ -0.93
RFFL-204ENST00000414419 CEP19Q96LK0 163 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 METTL8Q9H825 291 aaKnown RBP9.23□□□□□ -0.93
RFFL-204ENST00000414419 ISG20L2Q9H9L3 353 aaKnown RBP9.23□□□□□ -0.93
RFFL-204ENST00000414419 ELL3Q9HB65 397 aaPredicted RBP9.23□□□□□ -0.93
RFFL-204ENST00000414419 SIRT7Q9NRC8 400 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 MRPS18AQ9NVS2 196 aaKnown RBP9.23□□□□□ -0.93
RFFL-204ENST00000414419 FAM96BQ9Y3D0 163 aa9.23□□□□□ -0.93
RFFL-204ENST00000414419 DSCAML1Q8TD84 2053 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 IGKV1-27A0A075B6S5 117 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 hCG_1809904A0A1W2PP81 198 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 A0A1W2PPE2 198 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 A0A1W2PR64 198 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 A0A1W2PRV1 198 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 TMEM212A6NML5 194 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 OR4C45A6NMZ5 311 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 M0R1W7 72 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 HOXA3O43365 443 aaPredicted RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 CLIC3O95833 236 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 CRYBA1P05813 215 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 RNASE1P07998 156 aaKnown RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 CHRM2P08172 466 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 MYL12AP19105 171 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 AZGP1P25311 298 aaKnown RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 PEX2P28328 305 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 POU3F4P49335 361 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 CEBPDP49716 269 aaPredicted RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 COMPP49747 757 aaPredicted RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 RPL31P62899 125 aaKnown RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 MED21Q13503 144 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 SMN1Q16637 294 aaKnown RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 ZNF691Q5VV52 312 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 METAP1DQ6UB28 335 aaPredicted RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 Q6YL49 198 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 TMPRSS11AQ6ZMR5 421 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 C1orf122Q6ZSJ8 110 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 LHFPL2Q6ZUX7 228 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 UTS2BQ765I0 119 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 Q8IYB0 196 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 ASCC1Q8N9N2 400 aaKnown RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 TBC1D15Q8TC07 691 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 TSEN15Q8WW01 171 aaKnown RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 APH1BQ8WW43 257 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 EMG1Q92979 244 aaKnown RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 SLAMF9Q96A28 289 aa9.22□□□□□ -0.93
RFFL-204ENST00000414419 RNF166Q96A37 237 aaPredicted RBP9.22□□□□□ -0.93
RFFL-204ENST00000414419 SPSB1Q96BD6 273 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms