RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 EIF5AL1Q6IS14 154 aaKnown RBP12.74□□□□□ -0.37
SEMA3F-202ENST00000413852 C5orf46Q6UWT4 87 aa12.74□□□□□ -0.37
SEMA3F-202ENST00000413852 RHOVQ96L33 236 aa12.74□□□□□ -0.37
SEMA3F-202ENST00000413852 S100A13Q99584 98 aa12.74□□□□□ -0.37
SEMA3F-202ENST00000413852 AK3Q9UIJ7 227 aa12.74□□□□□ -0.37
SEMA3F-202ENST00000413852 CCDC187A0A096LP49 1063 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 FAM24AA6NFZ4 105 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 OR2J2O76002 312 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 JTBO76095 146 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 NDUFA6P56556 154 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 TLE1Q04724 770 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 C17orf67Q0P5P2 114 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 RSPO1Q2MKA7 263 aaPredicted RBP12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 MEMO1Q9Y316 297 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 FIGNL2A6NMB9 653 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 CELA2AP08217 269 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 DRD1P21728 446 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 APOBEC1P41238 236 aaKnown RBP12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 GLP1RP43220 463 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 TAS2R46P59540 309 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 MRPS21P82921 87 aaKnown RBP12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 P4HA3Q7Z4N8 544 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 PIGQQ9BRB3 760 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 FGF21Q9NSA1 209 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 FOXI3A8MTJ6 420 aaPredicted RBP12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 H0YL77 283 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 IGHV2-5P01817 119 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 MDKP21741 143 aaPredicted RBP12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 RPS23P62266 143 aaKnown RBP12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 ACTBL2Q562R1 376 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 THEM4Q5T1C6 240 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 UCN2Q96RP3 112 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 FAM212BQ9NTI7 297 aaPredicted RBP12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 ALKBH4Q9NXW9 302 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 FBLN5Q9UBX5 448 aa12.73□□□□□ -0.37
SEMA3F-202ENST00000413852 CRYM-AS1A6NIL9 109 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 H7C1Q1 480 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 PPIHO43447 177 aaKnown RBP12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 IFNA21P01568 189 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 ZNF43P17038 809 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 ZNF41P51814 821 aaPredicted RBP12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 MYPOPQ86VE0 399 aaPredicted RBP12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 FAM89BQ8N5H3 189 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 RTN4IP1Q8WWV3 396 aaPredicted RBP12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 ZDHHC12Q96GR4 267 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 ZNF385AQ96PM9 386 aaKnown RBP12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 RBM24Q9BX46 236 aaKnown RBP12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 METTL7AQ9H8H3 244 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 TAAR5O14804 337 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 DANCRP0C864 163 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 CSNK1A1P48729 337 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 HPSE2Q8WWQ2 592 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 MR1Q95460 341 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 GGACTQ9BVM4 153 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 KCNJ16Q9NPI9 418 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 FAM86C1Q9NVL1 165 aa12.72□□□□□ -0.37
SEMA3F-202ENST00000413852 IGKV1-27A0A075B6S5 117 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 SCGNO76038 276 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 OR2C1O95371 312 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 IGHV2-70P01814 119 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 RUNX1Q01196 453 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 PLPPR5Q32ZL2 321 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 SLC25A47Q6Q0C1 308 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 DOK3Q7L591 496 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 TMEM217Q8N7C4 229 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 SSC4DQ8WTU2 575 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 SCGB3A2Q96PL1 93 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 OR51M1Q9H341 326 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 ZNF726A6NNF4 738 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 CXCL1P09341 107 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 MTCP1P56278 107 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 SLC35A1P78382 337 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 ABCA11PQ4W5N1 156 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 OPN5Q6U736 354 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 SPNS3Q6ZMD2 512 aa12.71□□□□□ -0.37
SEMA3F-202ENST00000413852 ASPMQ8IZT6 3477 aa12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 GEMIN2O14893 280 aaKnown RBP12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 PHF1O43189 567 aaPredicted RBP12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 KIAA0141Q14154 515 aaPredicted RBP12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 OR2B11Q5JQS5 317 aa12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 SLC22A25Q6T423 547 aa12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 Q6ZPA2 131 aa12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 ST8SIA1Q92185 356 aa12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 NTNG2Q96CW9 530 aa12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 METTL1Q9UBP6 276 aaKnown RBP12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 ANXA10Q9UJ72 324 aa12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 COL6A3P12111 3177 aa12.71□□□□□ -0.38
SEMA3F-202ENST00000413852 ZNF407Q9C0G0 2248 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 PRRC2CQ9Y520 2896 aaKnown RBP12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 IGHV1OR21-1A0A087WYE8 117 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 AP4M1O00189 453 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 CST7O76096 145 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 S100A8P05109 93 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 EIF2S3P41091 472 aaKnown RBP12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 EIF5AP63241 154 aaKnown RBP12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 FAM3AP98173 230 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 PYY3Q5JQD4 70 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 GPR27Q9NS67 375 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 TUBD1Q9UJT1 453 aa12.7□□□□□ -0.38
SEMA3F-202ENST00000413852 A0A1B0GX78 115 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms