RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TTC23Q5W5X9 447 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 DHRSXQ8N5I4 330 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 ZNF676Q8N7Q3 588 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 TMEM185AQ8NFB2 350 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 OR51A4Q8NGJ6 313 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 PP6455Q8WZ26 134 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 LHX4Q969G2 390 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 SDSLQ96GA7 329 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 C1orf147Q96MC9 270 aaPredicted RBP12.21□□□□□ -0.45
LIMS4-201ENST00000413601 C8orf4Q9NR00 106 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 HHLA2Q9UM44 414 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 KPTNQ9Y664 436 aa12.21□□□□□ -0.45
LIMS4-201ENST00000413601 IGKV1-9A0A0C4DH69 117 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 F8VVB4 439 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 F8VWA3 439 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 LIMS3P0CW19 117 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 LIMS4P0CW20 117 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 PRDX2P32119 198 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 CAPZA1P52907 286 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 BPIFB3P59826 476 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 ERVK11-1P61568 191 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 PDCD1Q15116 288 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 CNN3Q15417 329 aaKnown RBP12.2□□□□□ -0.46
LIMS4-201ENST00000413601 DEFB112Q30KQ8 113 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 VMO1Q7Z5L0 202 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 PDZD9Q8IXQ8 264 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 OR13C3Q8NGS6 347 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 C8orf46Q8TAG6 207 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 SLAMF9Q96A28 289 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 BORCS8Q96FH0 119 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 HES4Q9HCC6 221 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 FGF20Q9NP95 211 aaPredicted RBP12.2□□□□□ -0.46
LIMS4-201ENST00000413601 MTCH1Q9NZJ7 389 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 OR14J1Q9UGF5 321 aa12.2□□□□□ -0.46
LIMS4-201ENST00000413601 IGHV1-69DA0A0B4J2H0 117 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 IGHV1-69P01742 117 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 ATF1P18846 271 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 PRTN3P24158 256 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 ETV1P50549 477 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 DLX1P56177 255 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 PRB3Q04118 309 aaPredicted RBP12.19□□□□□ -0.46
LIMS4-201ENST00000413601 OGFRL1Q5TC84 451 aaPredicted RBP12.19□□□□□ -0.46
LIMS4-201ENST00000413601 SLC25A26Q70HW3 274 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 UTS2BQ765I0 119 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 EGFL6Q8IUX8 553 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 CMTM4Q8IZR5 234 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 ZNF561Q8N587 486 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 KIR3DL3Q8N743 410 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 Q8N7P7 452 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 SETD9Q8NE22 299 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 CEP19Q96LK0 163 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 DMRTB1Q96MA1 342 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 JAM3Q9BX67 310 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 SIRT7Q9NRC8 400 aa12.19□□□□□ -0.46
LIMS4-201ENST00000413601 A0A1W2PQ09 198 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 SLC1A7O00341 560 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 CASQ2O14958 399 aaPredicted RBP12.18□□□□□ -0.46
LIMS4-201ENST00000413601 ZFPL1O95159 310 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 GNAO1P09471 354 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 AZGP1P25311 298 aaKnown RBP12.18□□□□□ -0.46
LIMS4-201ENST00000413601 RBP2P50120 134 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 GTF2A1P52655 376 aaPredicted RBP12.18□□□□□ -0.46
LIMS4-201ENST00000413601 GBX2P52951 348 aaPredicted RBP12.18□□□□□ -0.46
LIMS4-201ENST00000413601 ATP1B3P54709 279 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 MTCP1P56278 107 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 MRPL28Q13084 256 aaKnown RBP12.18□□□□□ -0.46
LIMS4-201ENST00000413601 SLC9A3R2Q15599 337 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 DNAAF1Q8NEP3 725 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 OR5AK2Q8NH90 309 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 GATAD2BQ8WXI9 593 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 GCDHQ92947 438 aaPredicted RBP12.18□□□□□ -0.46
LIMS4-201ENST00000413601 ZDHHC16Q969W1 377 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 PDCD1LG2Q9BQ51 273 aa12.18□□□□□ -0.46
LIMS4-201ENST00000413601 STAB1Q9NY15 2570 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 TRBV2A0A0J9YWF9 115 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 TMEM89A2RUT3 159 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 TMEM212A6NML5 194 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 KNG1P01042 644 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 PRKACBP22694 351 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 DCKP27707 260 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 CAPGP40121 348 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 POU3F4P49335 361 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 IL18R1Q13478 541 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 OR2G6Q5TZ20 316 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 XAF1Q6GPH4 301 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 C12orf54Q6X4T0 127 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 RNF144BQ7Z419 303 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 FAM185AQ8N0U4 392 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 OR13C9Q8NGT0 318 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 SLC25A28Q96A46 364 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 RFT1Q96AA3 541 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 OPALINQ96PE5 141 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 SPACA5Q96QH8 159 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 COMMD4Q9H0A8 199 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 PRDM13Q9H4Q3 707 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 DCLRE1BQ9H816 532 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 C19orf12Q9NSK7 152 aa12.17□□□□□ -0.46
LIMS4-201ENST00000413601 NKX1-2Q9UD57 310 aaPredicted RBP12.17□□□□□ -0.46
LIMS4-201ENST00000413601 TRBV23-1A0A0A0MS06 115 aa12.16□□□□□ -0.46
LIMS4-201ENST00000413601 IRGMA1A4Y4 181 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms