RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 C19orf12Q9NSK7 152 aa8.36□□□□□ -1.07
NCKIPSD-202ENST00000413374 MTCH1Q9NZJ7 389 aa8.36□□□□□ -1.07
NCKIPSD-202ENST00000413374 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.36□□□□□ -1.07
NCKIPSD-202ENST00000413374 ZNF222Q9UK12 451 aa8.36□□□□□ -1.07
NCKIPSD-202ENST00000413374 POLDIP2Q9Y2S7 368 aa8.36□□□□□ -1.07
NCKIPSD-202ENST00000413374 FAM96BQ9Y3D0 163 aa8.36□□□□□ -1.07
NCKIPSD-202ENST00000413374 DHRS7CA6NNS2 312 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 E9PI62 339 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 SLC1A7O00341 560 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 NOS1APO75052 506 aaPredicted RBP8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 GATBO75879 557 aaKnown RBP8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 CLIC3O95833 236 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 IGHV4-59P01825 116 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 CRYBA1P05813 215 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 OCM2P0CE71 109 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 OCMP0CE72 109 aaPredicted RBP8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 UBCP0CG48 685 aaKnown RBP8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 ZNF20P17024 532 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 ATF1P18846 271 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 MDKP21741 143 aaPredicted RBP8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 DUSP1P28562 367 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 POU3F4P49335 361 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 SNU13P55769 128 aaKnown RBP8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 CAV3P56539 151 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 ACTC1P68032 377 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 ACTA1P68133 377 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 COL10A1Q03692 680 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 SMN1Q16637 294 aaKnown RBP8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 SMIM21Q3B7S5 101 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 C11orf91Q3C1V1 193 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 TMEM244Q5VVB8 128 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 TMEM200BQ69YZ2 307 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 SLC25A26Q70HW3 274 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 RNF144BQ7Z419 303 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 KCTD20Q7Z5Y7 419 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 EGFL6Q8IUX8 553 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 ZNF676Q8N7Q3 588 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 ZNF555Q8NEP9 628 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 OR51A4Q8NGJ6 313 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 OR52I1Q8NGK6 324 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 C8orf46Q8TAG6 207 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 RFT1Q96AA3 541 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 PELI1Q96FA3 418 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 SDSLQ96GA7 329 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 Q96MT0 163 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 ALG8Q9BVK2 526 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 PRDM13Q9H4Q3 707 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 NOX4Q9NPH5 578 aa8.35□□□□□ -1.07
NCKIPSD-202ENST00000413374 STAB1Q9NY15 2570 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 IGKV1-9A0A0C4DH69 117 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 MEIOCA2RUB1 952 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 CLDN34H7C241 214 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 NPFFO15130 113 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 SPRY1O43609 319 aaPredicted RBP8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 MPZL2O60487 215 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 CCL3L1P16619 93 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 EEF1B2P24534 225 aaKnown RBP8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 MPZP25189 248 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 PAX6P26367 422 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 NPBWR2P48146 333 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 ATP1B3P54709 279 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 MTCP1P56278 107 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 ERVK11-1P61568 191 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 IL24Q13007 206 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 ALKBH1Q13686 389 aaKnown RBP8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 BLMHQ13867 455 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 GALEQ14376 348 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 MKXQ8IYA7 352 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 ZNF561Q8N587 486 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 KIR3DL3Q8N743 410 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 ASCC1Q8N9N2 400 aaKnown RBP8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 OR13C3Q8NGS6 347 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 TBC1D15Q8TC07 691 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 C17orf50Q8WW18 174 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 APH1BQ8WW43 257 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 CYGBQ8WWM9 190 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 TNFRSF14Q92956 283 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 CEP19Q96LK0 163 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 SPACA5Q96QH8 159 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 PKIBQ9C010 78 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 CHST5Q9GZS9 411 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 UNKLQ9H9P5 680 aaKnown RBP8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 ZMAT3Q9HA38 289 aaKnown RBP8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 ERVK13-1Q9NX77 482 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 IL36RNQ9UBH0 155 aa8.34□□□□□ -1.07
NCKIPSD-202ENST00000413374 OR4C45A6NMZ5 311 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 M0R1W7 72 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 ANGPTL7O43827 346 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 FADS2O95864 444 aaKnown RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 KNG1P01042 644 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 TK1P04183 234 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 BCL3P20749 454 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 AZGP1P25311 298 aaKnown RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 RBP2P50120 134 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 GTF2A1P52655 376 aaPredicted RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 GBX2P52951 348 aaPredicted RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 EDDM3BP56851 147 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 ACTA2P62736 377 aa8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 RPL31P62899 125 aaKnown RBP8.33□□□□□ -1.08
NCKIPSD-202ENST00000413374 ACTG2P63267 376 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms