RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 BTF3L4Q96K17 158 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 ARHGDIGQ99819 225 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 HEATR1Q9H583 2144 aaKnown RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 C19orf53Q9UNZ5 99 aaPredicted RBP7.51□□□□□ -1.21
SCN9A-203ENST00000409672 HDGFL3Q9Y3E1 203 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 LRP12Q9Y561 859 aa7.51□□□□□ -1.21
SCN9A-203ENST00000409672 DHHO43323 396 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 EPXP11678 715 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 HOXB3P14651 431 aaPredicted RBP7.5□□□□□ -1.21
SCN9A-203ENST00000409672 AREGP15514 252 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 CEACAM3P40198 252 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 TGIF1Q15583 401 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 FAM27D1Q5T7N8 215 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 LHX8Q68G74 356 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 NHLRC2Q8NBF2 726 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 PDLIM5Q96HC4 596 aaKnown RBP7.5□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF696Q9H7X3 374 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 CEPT1Q9Y6K0 416 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 ZFC3H1O60293 1989 aaKnown RBP7.5□□□□□ -1.21
SCN9A-203ENST00000409672 DOCK3Q8IZD9 2030 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 A0A087WUJ7 227 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF207O43670 478 aaKnown RBP7.5□□□□□ -1.21
SCN9A-203ENST00000409672 YBX1P67809 324 aaKnown RBP7.5□□□□□ -1.21
SCN9A-203ENST00000409672 FCRL1Q96LA6 429 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 ZNF385DQ9H6B1 395 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 AKIRIN1Q9H9L7 192 aaPredicted RBP7.5□□□□□ -1.21
SCN9A-203ENST00000409672 NKX2-8O15522 239 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 ACHEP22303 614 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 FKBP2P26885 142 aaKnown RBP7.5□□□□□ -1.21
SCN9A-203ENST00000409672 CALCRP30988 508 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 ROM1Q03395 351 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 FOXC2Q99958 501 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 TRAV38-1A0A0B4J264 116 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 H7BYZ3 331 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 KCNMB1Q16558 191 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 TMEM97Q5BJF2 176 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 ATP1A1-AS1Q5TC04 95 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 TMUB2Q71RG4 321 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 NRG4Q8WWG1 115 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 OPN3Q9H1Y3 402 aaPredicted RBP7.5□□□□□ -1.21
SCN9A-203ENST00000409672 ALPLP05186 524 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 NME1P15531 152 aaKnown RBP7.5□□□□□ -1.21
SCN9A-203ENST00000409672 ST8SIA1Q92185 356 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 TGFBR1P36897 503 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 WNT5AP41221 380 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 MFSD4AQ8N468 514 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 C5orf17Q8NAS9 161 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 SIGLEC11Q96RL6 698 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 PRDM4Q9UKN5 801 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 DOCK1Q14185 1865 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 A0A1W2PPQ1 181 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 OR3A1P47881 315 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 FCN2Q15485 313 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 GGTA1PQ4G0N0 100 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 SLC35B4Q969S0 331 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 DUSP22Q9NRW4 184 aa7.5□□□□□ -1.21
SCN9A-203ENST00000409672 GLULP15104 373 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 THBS4P35443 961 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 CCR9P51686 369 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 SLC38A6Q8IZM9 456 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 OR4B1Q8NGF8 309 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 ANKRD60Q9BZ19 345 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 IGHV5-10-1A0A0J9YXX1 117 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 RFPL4AA6NLU0 287 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 RFPL4AL1F8VTS6 287 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 DEFA6Q01524 100 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 VAMP3Q15836 100 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 CTU2Q2VPK5 515 aaKnown RBP7.49□□□□□ -1.21
SCN9A-203ENST00000409672 C6orf201Q7Z4U5 140 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 ASB1Q9Y576 335 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 ARID1AO14497 2285 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 ATF1P18846 271 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 FPR2P25090 351 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 PTGFRP43088 359 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 SUMO1P63165 101 aaKnown RBP7.49□□□□□ -1.21
SCN9A-203ENST00000409672 DGCR2P98153 550 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 PRSS3P2Q8NHM4 247 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 PRR13Q9NZ81 148 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 KCNK17Q96T54 332 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 SMIM7Q9BQ49 75 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 TRAV34A0A0B4J273 112 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 hADV38S2A0JD32 116 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 ARRB2P32121 409 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 LPAR6P43657 344 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 GZMKP49863 264 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 C1QL3Q5VWW1 255 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 AMER3Q8N944 861 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 TMEM102Q8N9M5 508 aaPredicted RBP7.49□□□□□ -1.21
SCN9A-203ENST00000409672 F5P12259 2224 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 KDM3BQ7LBC6 1761 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 CBY3A6NI87 242 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 ICMTO60725 284 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 SP1P08047 785 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 VDAC1P21796 283 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 OR5AP2Q8NGF4 316 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 OR5A2Q8NGI9 324 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 TMED6Q8WW62 240 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 FGF11Q92914 225 aa7.49□□□□□ -1.21
SCN9A-203ENST00000409672 WDR89Q96FK6 387 aaPredicted RBP7.49□□□□□ -1.21
SCN9A-203ENST00000409672 CXXC4Q9H2H0 198 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms