RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CYTIPO60759 359 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 FBXO24O75426 580 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 CLDN1O95832 211 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 HLA-DQB1P01920 261 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 APOA2P02652 100 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 VSIG8P0DPA2 414 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 PRF1P14222 555 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 IL11P20809 199 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 CHATP28329 748 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 S100A7P31151 101 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 FOXL2P58012 376 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 DHRS2Q13268 280 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 BTN1A1Q13410 526 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 SNTB1Q13884 538 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 KCNMB1Q16558 191 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 PDLIM3Q53GG5 364 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 TSPO2Q5TGU0 170 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 TMEM268Q5VZI3 342 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 LRRTM1Q86UE6 522 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 WFDC8Q8IUA0 241 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 ZNF485Q8NCK3 441 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 ZNF680Q8NEM1 530 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 TCTEX1D2Q8WW35 142 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 MARC2Q969Z3 335 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 SCMH1Q96GD3 660 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 CIB3Q96Q77 187 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 LINC00470Q9BZP3 86 aa4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 STRAPQ9Y3F4 350 aaKnown RBP4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 CHCHD2Q9Y6H1 151 aaPredicted RBP4.17□□□□□ -1.74
PCDH11X-207ENST00000406881 SPTBN2O15020 2390 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 CCDC88CQ9P219 2028 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 TRGV8A0A0C4DH27 118 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 A0A1W2PPV4 95 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 LNP1A1A4G5 178 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 BTBD17A6NE02 478 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 BCL2L11O43521 198 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 SULT1A3P0DMM9 295 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 SULT1A4P0DMN0 295 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 SNCAP37840 140 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 ALDH3B1P43353 468 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 RAB5CP51148 216 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 TAS2R30P59541 319 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 RAB5BP61020 215 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 IFITM3Q01628 133 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 IGFBP7Q16270 282 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 IGSF11Q5DX21 431 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 C11orf87Q6NUJ2 197 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 RBMS3Q6XE24 437 aaKnown RBP4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 H2BFWTQ7Z2G1 175 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 RFLNBQ8N5W9 214 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 WDSUB1Q8N9V3 476 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 ABHD5Q8WTS1 349 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 ST8SIA4Q92187 359 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 TMEM54Q969K7 222 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 TMEM45BQ96B21 275 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 GALMQ96C23 342 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 ADAT3Q96EY9 351 aaPredicted RBP4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 S1PR3Q99500 378 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 TAAR3PQ9P1P4 343 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 RNF150Q9ULK6 438 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 RIF1Q5UIP0 2472 aaKnown RBP4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 C9orf170A2RU37 121 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM221AA4D161 298 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A10PA6NDY2 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A18PA6NE21 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A16PA6NEW6 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A20PA6NIJ5 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A8PA6NJQ4 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A7PA6NKC0 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 TMEM210A6NLX4 147 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A22PA8MWA6 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A12PA8MX19 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A5PA8MXJ8 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A23PA8MXZ1 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 J3QW42 95 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 MPPED1O15442 326 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 GMDSO60547 372 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 NPIPB7O75200 414 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 PNPP00491 289 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 PDGFAP04085 211 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 IFNA4P05014 189 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A15PP0C7V4 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A13PP0C7W8 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A14PP0C7W9 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM90A24PP0C7X0 464 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 PATE4P0C8F1 98 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 PTHLHP12272 177 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 RPL12P30050 165 aaKnown RBP4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 GPR12P47775 334 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 P2RX3P56373 397 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 EFNB1P98172 346 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 P2RY6Q15077 328 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 PLGLAQ15195 96 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 GABRA6Q16445 453 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 LTC4SQ16873 150 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 NRN1LQ496H8 165 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 KRTCAP3Q53RY4 240 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 FAM209AQ5JX71 171 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 SFRP5Q5T4F7 317 aa4.16□□□□□ -1.74
PCDH11X-207ENST00000406881 OR52W1Q6IF63 320 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms